myRT

myRT report for GCA_001887415.1_ASM188741v1

Download annotations/find similar RTs

Seq: CP013311.1 Vibrio cholerae strain E1320, complete sequence (2951445 bp)
Overview 1 RT 1: 2555346-2560485 bp Neighborhood of RT #1 [2555346, 2560607] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 2555346-2556206 bp Ori: APF68660.1 Feature: domain Description: LysR Location: 2555352-2556180 bp Feature: domain Description: LysR Location: 2555352-25561 80 bp Feature: gene Location: 2556136-2556921 bp Ori: APF68661.1 Feature: domain Description: PRK10621 Location: 2556145-2556916 bp Feature: domain Description: PRK1 0621 Location: 25561 45-255691 6 bp Feature: gene Location: 2557407-2558354 bp Ori: APF68662.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2557521-2558118 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2557521 -25581 1 8 bp Feature: gene Location: 2558355-2559977 bp Ori: APF68663.1 Feature: domain Description: COG3950 Location: 2558541-2559972 bp Feature: domain Description: COG3950 Location: 2558541 -2559972 bp Feature: gene Location: 2559990-2560607 bp Ori: APF68664.1 Feature: domain Description: TIGR02646 Location: 2560101-2560485 bp Feature: domain Description: TIGR02646 Location: 25601 01 -2560485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: CP013312.1 Vibrio cholerae strain E1320 chromosome 2, complete sequence (1158995 bp)
Overview 1 RT 1: 717138-721309 bp Neighborhood of RT #1 [717138, 721309] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 717138-717575 bp Ori: APF69646.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 717150-717543 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 717150-717543 bp Feature: gene Location: 717736-718083 bp Feature: gene Location: 718224-719789 bp Ori: APF69648.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 718659-719136 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 718659-719136 bp Feature: gene Location: 719925-720485 bp Feature: gene Location: 720635-721309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14