myRT

myRT report for GCA_001887435.1_ASM188743v1

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Seq: CP013303.1 Vibrio cholerae strain CRC711 chromosome 1, complete sequence (2993255 bp)
Overview 1 RT 1: 2584682-2590966 bp Neighborhood of RT #1 [2584682, 2590966] PRK10578 PRK10621 RVT-Retrons COG3950 Feature: gene Location: 2584682-2585302 bp Ori: APF53784.1 Feature: domain Description: PRK10578 Location: 2584697-2585297 bp Feature: domain Description: PRK1 0578 Location: 2584697-2585297 bp Feature: gene Location: 2586244-2587029 bp Ori: APF53785.1 Feature: domain Description: PRK10621 Location: 2586253-2587024 bp Feature: domain Description: PRK1 0621 Location: 2586253-2587024 bp Feature: gene Location: 2587515-2588462 bp Ori: APF53786.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2587629-2588226 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2587629-2588226 bp Feature: gene Location: 2588463-2590085 bp Ori: APF53787.1 Feature: domain Description: COG3950 Location: 2588649-2590080 bp Feature: domain Description: COG3950 Location: 2588649-2590080 bp Feature: gene Location: 2590820-2590966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10578 (hypothetical protein; Provisional), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: CP013304.1 Vibrio cholerae strain CRC711 chromosome 2, complete sequence (1064265 bp)
Overview 1 RT 1: 344709-348964 bp Neighborhood of RT #1 [344709, 348964] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 344709-345230 bp Ori: APF54500.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 344805-345198 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 344805-345198 bp Feature: gene Location: 345451-345738 bp Feature: gene Location: 345879-347444 bp Ori: APF54502.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 346314-346791 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 346314-346791 bp Feature: gene Location: 347580-348140 bp Feature: gene Location: 348290-348964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14