myRT

myRT report for GCA_001887455.1_ASM188745v1

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Seq: CP013305.1 Vibrio cholerae strain CRC1106 chromosome 1, complete sequence (2999012 bp)
Overview 1 RT 1: 2584709-2590993 bp Neighborhood of RT #1 [2584709, 2590993] PRK10578 PRK10621 RVT-Retrons COG3950 Feature: gene Location: 2584709-2585329 bp Ori: APF57523.1 Feature: domain Description: PRK10578 Location: 2584724-2585324 bp Feature: domain Description: PRK1 0578 Location: 2584724-2585324 bp Feature: gene Location: 2586271-2587056 bp Ori: APF57524.1 Feature: domain Description: PRK10621 Location: 2586280-2587051 bp Feature: domain Description: PRK1 0621 Location: 2586280-2587051 bp Feature: gene Location: 2587542-2588489 bp Ori: APF57525.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2587656-2588253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2587656-2588253 bp Feature: gene Location: 2588490-2590112 bp Ori: APF57526.1 Feature: domain Description: COG3950 Location: 2588676-2590107 bp Feature: domain Description: COG3950 Location: 2588676-25901 07 bp Feature: gene Location: 2590847-2590993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10578 (hypothetical protein; Provisional), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: CP013306.1 Vibrio cholerae strain CRC1106 chromosome 2, complete sequence (1100107 bp)
Overview 1 RT 1: 344714-348969 bp Neighborhood of RT #1 [344714, 348969] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 344714-345235 bp Ori: APF58253.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 344810-345203 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 344810-3452 03 bp Feature: gene Location: 345456-345743 bp Feature: gene Location: 345884-347449 bp Ori: APF58255.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 346319-346796 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 346319-346796 bp Feature: gene Location: 347585-348145 bp Feature: gene Location: 348295-348969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14