myRT

myRT report for GCA_001887495.1_ASM188749v1

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Seq: CP013309.1 Vibrio cholerae strain E1162 chromosome 1, complete sequence (2996535 bp)
Overview 1 RT 1: 2350866-2356101 bp Neighborhood of RT #1 [2350866, 2356127] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 2350866-2351483 bp Ori: APF64844.1 Feature: domain Description: TIGR02646 Location: 2350977-2351361 bp Feature: domain Description: TIGR02646 Location: 2350977-2351 361 bp Feature: gene Location: 2351496-2353118 bp Ori: APF64845.1 Feature: domain Description: COG3950 Location: 2351682-2353113 bp Feature: domain Description: COG3950 Location: 2351 682-23531 1 3 bp Feature: gene Location: 2353119-2354066 bp Ori: APF64846.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2353233-2353830 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2353233-2353830 bp Feature: gene Location: 2354552-2355337 bp Ori: APF64847.1 Feature: domain Description: PRK10621 Location: 2354561-2355332 bp Feature: domain Description: PRK1 0621 Location: 2354561 -2355332 bp Feature: gene Location: 2355267-2356127 bp Ori: APF64848.1 Feature: domain Description: LysR Location: 2355273-2356101 bp Feature: domain Description: LysR Location: 2355273-23561 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)

Seq: CP013310.1 Vibrio cholerae strain E1162 chromosome 2, complete sequence (1114337 bp)
Overview 1 RT 1: 475591-479762 bp Neighborhood of RT #1 [475591, 479762] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 475591-476028 bp Ori: APF65854.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 475603-475996 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 475603-475996 bp Feature: gene Location: 476189-476536 bp Feature: gene Location: 476677-478242 bp Ori: APF65856.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 477112-477589 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 477112 -477589 bp Feature: gene Location: 478378-478938 bp Feature: gene Location: 479088-479762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14