myRT

myRT report for GCA_001887515.1_ASM188751v1

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Seq: CP013317.1 Vibrio cholerae strain NCTC5395 chromosome 1, complete sequence (2981414 bp)
Overview 1 RT 1: 2572752-2579027 bp Neighborhood of RT #1 [2572752, 2579027] PRK10578 PRK10621 RVT-Retrons COG3950 Feature: gene Location: 2572752-2573372 bp Ori: APF79882.1 Feature: domain Description: PRK10578 Location: 2572767-2573367 bp Feature: domain Description: PRK1 0578 Location: 2572767-2573367 bp Feature: gene Location: 2574314-2575099 bp Ori: APF79883.1 Feature: domain Description: PRK10621 Location: 2574323-2575094 bp Feature: domain Description: PRK1 0621 Location: 2574323-2575094 bp Feature: gene Location: 2575576-2576523 bp Ori: APF79884.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2575690-2576287 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2575690-2576287 bp Feature: gene Location: 2576524-2578146 bp Ori: APF79885.1 Feature: domain Description: COG3950 Location: 2576710-2578141 bp Feature: domain Description: COG3950 Location: 257671 0-25781 41 bp Feature: gene Location: 2578881-2579027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10578 (hypothetical protein; Provisional), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: CP013318.1 Vibrio cholerae strain NCTC5395 chromosome 2, complete sequence (1188831 bp)
Overview 1 RT 1: 360582-364837 bp Neighborhood of RT #1 [360582, 364837] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 360582-361103 bp Ori: APF80624.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 360678-361071 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 360678-361071 bp Feature: gene Location: 361324-361611 bp Feature: gene Location: 361752-363317 bp Ori: APF80626.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 362187-362664 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 362 187-362 664 bp Feature: gene Location: 363453-364013 bp Feature: gene Location: 364163-364837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14