myRT

myRT report for GCA_001887635.1_ASM188763v1

Download annotations/find similar RTs

Seq: CP013316.1 Vibrio cholerae strain M2140 chromosome 2, complete sequence (1075375 bp)
Overview 1 RT 1: 97427-101682 bp Neighborhood of RT #1 [97427, 101682] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 97427-97948 bp Ori: APF76611.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 97523-97916 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 97523-9791 6 bp Feature: gene Location: 98169-98456 bp Feature: gene Location: 98597-100162 bp Ori: APF76613.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 99032-99509 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 99032-99509 bp Feature: gene Location: 100298-100858 bp Feature: gene Location: 101008-101682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14

Seq: CP013315.1 Vibrio cholerae strain M2140 chromosome 1, complete sequence (2939488 bp)
Overview 1 RT 1: 556969-563248 bp Neighborhood of RT #1 [556969, 563253] COG3950 RVT-Retrons PRK10621 PRK10578 Feature: gene Location: 556969-557115 bp Feature: gene Location: 557850-559472 bp Ori: APF74446.1 Feature: domain Description: COG3950 Location: 558036-559467 bp Feature: domain Description: COG3950 Location: 558036-559467 bp Feature: gene Location: 559473-560420 bp Ori: APF74447.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559587-560184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559587-560184 bp Feature: gene Location: 560906-561691 bp Ori: APF74448.1 Feature: domain Description: PRK10621 Location: 560915-561686 bp Feature: domain Description: PRK1062 1 Location: 560915-561686 bp Feature: gene Location: 562633-563253 bp Ori: APF74449.1 Feature: domain Description: PRK10578 Location: 562648-563248 bp Feature: domain Description: PRK10578 Location: 562 648-5632 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), PRK10578 (hypothetical protein; Provisional)