myRT

myRT report for GCA_001887995.2_ASM188799v2

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Seq: CP031885.1 Klebsiella pneumoniae strain WCHKP095845 chromosome, complete genome (5239924 bp)
Overview 1 RT 1: 1233005-1237271 bp 2 RT 2: 3132680-3136779 bp Neighborhood of RT #1 [1233005, 1237276] D PRK09678 RVT-Retrons SmpB PRK10724 Neighborhood of RT #2 [3132680, 3136790] umuC PRK10276 RVT-GII DinI Feature: gene Location: 1233005-1234105 bp Ori: AXU01607.1 Feature: domain Description: D Location: 1233017-1234091 bp Feature: domain Description: D Location: 1 23301 7-1 234091 bp Feature: gene Location: 1234196-1234414 bp Ori: AXU01608.1 Feature: domain Description: PRK09678 Location: 1234199-1234397 bp Feature: domain Description: PRK09678 Location: 1 2341 99-1 234397 bp Feature: gene Location: 1234818-1235591 bp Ori: AXU01609.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1234878-1235412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 234878-1 23541 2 bp Feature: gene Location: 1236207-1236689 bp Ori: AXU01610.1 Feature: domain Description: SmpB Location: 1236237-1236681 bp Feature: domain Description: SmpB Location: 1 236237-1 236681 bp Feature: gene Location: 1236800-1237276 bp Ori: AXU01611.1 Feature: domain Description: PRK10724 Location: 1236806-1237271 bp Feature: domain Description: PRK1 0724 Location: 1 236806-1 237271 bp Feature: gene Location: 3132680-3133945 bp Ori: AXU03355.1 Gene: umuC Feature: domain Description: umuC Location: 3132683-3133943 bp Feature: domain Description: umuC Location: 31 32683-31 33943 bp Feature: gene Location: 3133948-3134367 bp Ori: AXU03356.1 Feature: domain Description: PRK10276 Location: 3133951-3134362 bp Feature: domain Description: PRK1 0276 Location: 31 33951 -31 34362 bp Feature: gene Location: 3134446-3135930 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134848-3135538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 34848-31 35538 bp Feature: gene Location: 3135930-3136181 bp Feature: gene Location: 3136548-3136790 bp Ori: AXU03358.1 Feature: domain Description: DinI Location: 3136599-3136779 bp Feature: domain Description: DinI Location: 31 36599-31 36779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183)

Seq: CP031883.1 Klebsiella pneumoniae strain WCHKP095845 plasmid pMCR8_095845, complete sequence (110966 bp)
Overview 1 RT 1: 32445-35898 bp Neighborhood of RT #1 [32445, 35936] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 32445-32876 bp Ori: AXU00209.1 Feature: domain Description: PRK10276 Location: 32496-32859 bp Feature: domain Description: PRK102 76 Location: 32 496-32 859 bp Feature: gene Location: 33034-33285 bp Feature: gene Location: 33285-34769 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33687-34377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33687-34377 bp Feature: gene Location: 34921-35618 bp Feature: domain Description: Zn_Tnp_IS1 Location: 34927-35029 bp Feature: domain Description: Zn_Tnp_IS1 Location: 3492 7-3502 9 bp Feature: domain Description: HTH_Tnp_IS1 Location: 35050-35182 bp Feature: domain Description: HTH_Tnp_IS1 Location: 35050-35182 bp Feature: gene Location: 35628-35936 bp Feature: domain Description: Rep_3 Location: 35634-35898 bp Feature: domain Description: Rep_3 Location: 35634-35898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)