myRT

myRT report for GCA_001888075.1_ASM188807v1

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Seq: CP017848.1 Escherichia coli strain FMU073332 plasmid pEcoFMU07332d sequence (137665 bp)
Overview 1 RT 1: 39389-43362 bp 2 RT 2: 125573-129650 bp Neighborhood of RT #1 [39389, 43400] InsE PHA02517 RVT-GII GIIM PHA02517 Transposase_20 Neighborhood of RT #2 [125573, 129652] COG3547 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 39389-39715 bp Ori: APG37910.1 Feature: domain Description: InsE Location: 39392-39713 bp Feature: domain Description: InsE Location: 39392-3971 3 bp Feature: gene Location: 39712-40072 bp Feature: domain Description: PHA02517 Location: 39775-40072 bp Feature: domain Description: PHA0251 7 Location: 39775-40072 bp Feature: gene Location: 40801-42309 bp Ori: APG37911.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41059-41791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 059-41 791 bp Feature: domain Description: GIIM Note: maturase Location: 41866-42064 bp Feature: domain Description: GIIM Note: maturase Location: 41 866-42064 bp Feature: gene Location: 42486-42872 bp Ori: APG37912.1 Feature: domain Description: PHA02517 Location: 42489-42870 bp Feature: domain Description: PHA0251 7 Location: 42489-42870 bp Feature: gene Location: 43029-43400 bp Ori: APG37913.1 Feature: domain Description: Transposase_20 Location: 43248-43362 bp Feature: domain Description: Transposase_20 Location: 43248-43362 bp Feature: gene Location: 125573-126166 bp Ori: APG37990.1 Feature: domain Description: COG3547 Location: 125588-126056 bp Feature: domain Description: COG3547 Location: 1 25588-1 26056 bp Feature: gene Location: 126169-126648 bp Feature: domain Description: PHA02517 Location: 126172-126646 bp Feature: domain Description: PHA0251 7 Location: 1 261 72-1 26646 bp Feature: gene Location: 126732-128240 bp Ori: APG37991.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126990-127722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26990-1 27722 bp Feature: domain Description: GIIM Note: maturase Location: 127797-127995 bp Feature: domain Description: GIIM Note: maturase Location: 1 27797-1 27995 bp Feature: gene Location: 128847-129326 bp Ori: APG37992.1 Feature: domain Description: PHA02517 Location: 128907-129261 bp Feature: domain Description: PHA0251 7 Location: 1 28907-1 29261 bp Feature: gene Location: 129326-129652 bp Ori: APG37993.1 Feature: domain Description: InsE Location: 129329-129650 bp Feature: domain Description: InsE Location: 1 29329-1 29650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Transposase_20 (pfam02371), COG3547 (Transposase )

Seq: CP017844.1 Escherichia coli strain FMU073332, complete genome (4718719 bp)
Overview 1 RT 1: 1365552-1368868 bp 2 RT 2: 3233961-3239715 bp Neighborhood of RT #1 [1365552, 1368870] PHA02517 RVT-GII GIIM PHA02517 PRK08178 Neighborhood of RT #2 [3233961, 3239780] DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1365552-1366031 bp Ori: APG34479.1 Feature: domain Description: PHA02517 Location: 1365612-1365966 bp Feature: domain Description: PHA02 517 Location: 1365612 -1365966 bp Feature: gene Location: 1365958-1366329 bp Feature: gene Location: 1366638-1368146 bp Ori: APG34481.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366896-1367628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366896-136762 8 bp Feature: domain Description: GIIM Note: maturase Location: 1367703-1367901 bp Feature: domain Description: GIIM Note: maturase Location: 1367703-1367901 bp Feature: gene Location: 1368230-1368709 bp Feature: domain Description: PHA02517 Location: 1368233-1368707 bp Feature: domain Description: PHA02 517 Location: 13682 33-1368707 bp Feature: gene Location: 1368757-1368870 bp Ori: APG34482.1 Feature: domain Description: PRK08178 Location: 1368766-1368868 bp Feature: domain Description: PRK08178 Location: 1368766-1368868 bp Feature: gene Location: 3233961-3236480 bp Feature: domain Description: DEXXQc_SF1 Location: 3233967-3235128 bp Feature: domain Description: DEXXQc_SF1 Location: 32 33967-32 3512 8 bp Feature: domain Description: SF1_C_Upf1 Location: 3235137-3235665 bp Feature: domain Description: SF1_C_Upf1 Location: 32 35137-32 35665 bp Feature: domain Description: MTES_1575 Location: 3235794-3236085 bp Feature: domain Description: MTES_1575 Location: 32 35794-32 36085 bp Feature: gene Location: 3236701-3237159 bp Feature: domain Description: PHA02517 Location: 3236704-3237151 bp Feature: domain Description: PHA02 517 Location: 32 36704-32 37151 bp Feature: gene Location: 3237240-3238748 bp Ori: APG36154.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3237498-3238230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 37498-32 382 30 bp Feature: domain Description: GIIM Note: maturase Location: 3238305-3238503 bp Feature: domain Description: GIIM Note: maturase Location: 32 38305-32 38503 bp Feature: gene Location: 3238717-3239142 bp Feature: gene Location: 3239355-3239780 bp Ori: APG36156.1 Feature: domain Description: PHA02517 Location: 3239376-3239715 bp Feature: domain Description: PHA02 517 Location: 32 39376-32 39715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK08178 (acetolactate synthase 1 small subunit), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741)