myRT

myRT report for GCA_001889165.1_ASM188916v1

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Seq: CP016020.1 Bacillus weihaiensis strain Alg07 chromosome, complete genome (4344873 bp)
Overview 1 RT 1: 1090372-1094999 bp 2 RT 2: 1182174-1187355 bp 3 RT 3: 1637848-1644292 bp 4 RT 4: 2250046-2256316 bp 5 RT 5: 3624054-3629083 bp Neighborhood of RT #1 [1090372, 1094999] PRK13291 RVT-GII HNHc Neighborhood of RT #2 [1182174, 1187369] Maf RadC RVT-GII Intron_maturas2 PRK13927 Neighborhood of RT #3 [1637848, 1644357] IbpA RVT-GII HNHc NagE YprA Neighborhood of RT #4 [2250046, 2256318] nicotinamidase_related RVT-GII HNHc FDH_like_1 gly_Cac_T_rel Neighborhood of RT #5 [3624054, 3629083] RVT-UG3 RVT-UG8 EcoEI_R_C Feature: gene Location: 1090372-1090899 bp Feature: domain Description: PRK13291 Location: 1090381-1090897 bp Feature: domain Description: PRK1 3291 Location: 1 090381 -1 090897 bp Feature: gene Location: 1091069-1091437 bp Feature: gene Location: 1092180-1093973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092471-1093170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 092471 -1 0931 70 bp Feature: domain Description: HNHc Note: nucleases Location: 1093719-1093863 bp Feature: domain Description: HNHc Note: nucleases Location: 1 09371 9-1 093863 bp Feature: gene Location: 1094279-1094590 bp Feature: gene Location: 1094706-1094999 bp Feature: gene Location: 1182174-1182743 bp Feature: domain Description: Maf Location: 1182180-1182738 bp Feature: domain Description: Maf Location: 1 1 821 80-1 1 82738 bp Feature: gene Location: 1182855-1183418 bp Feature: domain Description: RadC Location: 1182879-1183407 bp Feature: domain Description: RadC Location: 1 1 82879-1 1 83407 bp Feature: gene Location: 1183974-1185482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184247-1185009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 84247-1 1 85009 bp Feature: domain Description: Intron_maturas2 Location: 1185189-1185372 bp Feature: domain Description: Intron_maturas2 Location: 1 1 851 89-1 1 85372 bp Feature: gene Location: 1185515-1185643 bp Feature: gene Location: 1186347-1187369 bp Feature: domain Description: PRK13927 Location: 1186359-1187355 bp Feature: domain Description: PRK1 3927 Location: 1 1 86359-1 1 87355 bp Feature: gene Location: 1637848-1638036 bp Feature: gene Location: 1638106-1638585 bp Feature: domain Description: IbpA Location: 1638172-1638559 bp Feature: domain Description: IbpA Location: 1 6381 72-1 638559 bp Feature: gene Location: 1639430-1641223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639721-1640420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 639721 -1 640420 bp Feature: domain Description: HNHc Note: nucleases Location: 1640969-1641113 bp Feature: domain Description: HNHc Note: nucleases Location: 1 640969-1 641 1 1 3 bp Feature: gene Location: 1641242-1641868 bp Feature: domain Description: NagE Location: 1641401-1641845 bp Feature: domain Description: NagE Location: 1 641 401 -1 641 845 bp Feature: gene Location: 1642066-1644357 bp Feature: domain Description: YprA Location: 1642099-1644292 bp Feature: domain Description: YprA Location: 1 642099-1 644292 bp Feature: gene Location: 2250046-2250606 bp Feature: domain Description: nicotinamidase_related Location: 2250067-2250529 bp Feature: domain Description: nicotinamidase_related Location: 2250067-2250529 bp Feature: gene Location: 2250658-2250828 bp Feature: gene Location: 2250847-2252640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251138-2251837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251 1 38-2251 837 bp Feature: domain Description: HNHc Note: nucleases Location: 2252386-2252530 bp Feature: domain Description: HNHc Note: nucleases Location: 2252386-2252530 bp Feature: gene Location: 2253705-2254934 bp Feature: domain Description: FDH_like_1 Location: 2253798-2254932 bp Feature: domain Description: FDH_like_1 Location: 2253798-2254932 bp Feature: gene Location: 2255143-2256318 bp Feature: domain Description: gly_Cac_T_rel Location: 2255164-2256316 bp Feature: domain Description: gly_Cac_T_rel Location: 22551 64-225631 6 bp Feature: gene Location: 3624054-3624320 bp Feature: gene Location: 3624388-3624684 bp Feature: gene Location: 3624718-3626067 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3625042-3625501 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3625042-3625501 bp Feature: gene Location: 3626317-3628263 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3626824-3627262 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3626824-3627262 bp Feature: gene Location: 3628408-3628818 bp Feature: domain Description: EcoEI_R_C Location: 3628432-3628786 bp Feature: domain Description: EcoEI_R_C Location: 3628432-3628786 bp Feature: gene Location: 3628943-3629083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13291 (putative metal-dependent hydrolase), RVT-GII, HNHc (smart00507), Maf (pfam02545), RadC (pfam04002), Intron_maturas2 (pfam01348), PRK13927 (rod shape-determining protein MreB; Provisional), IbpA (COG0071), NagE (COG2190), YprA (COG1205)
nicotinamidase_related (cd01014), FDH_like_1 (cd08283), gly_Cac_T_rel (TIGR01825), RVT-UG3, RVT-UG8, EcoEI_R_C (pfam08463)