myRT

myRT report for GCA_001895285.1_ASM189528v1

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Seq: CP017761.1 Marinilactibacillus sp. 15R chromosome, complete genome (2767908 bp)
Overview 1 RT 1: 720250-726347 bp 2 RT 2: 1349055-1354854 bp 3 RT 3: 2408182-2414666 bp Neighborhood of RT #1 [720250, 726358] IstB_IS21_ATP IstB_IS21 COG4584 RVT-GII YtxH YtxH DDE_Tnp_1_4 Neighborhood of RT #2 [1349055, 1354871] exosort_acyl exosort_acyl PRK08223 RVT-GII GIIM PRK06522 M20_Acy1-like Neighborhood of RT #3 [2408182, 2414692] PRK07308 ARA1 RVT-GII GIIM YfhO GtrA Feature: gene Location: 720250-721002 bp Ori: API90235.1 Feature: domain Description: IstB_IS21_ATP Location: 720319-720400 bp Feature: domain Description: IstB_IS21 _ATP Location: 72031 9-720400 bp Feature: domain Description: IstB_IS21 Location: 720412-720940 bp Feature: domain Description: IstB_IS21 Location: 72041 2-720940 bp Feature: gene Location: 720995-722551 bp Ori: API88420.1 Feature: domain Description: COG4584 Location: 721121-721838 bp Feature: domain Description: COG4584 Location: 721 1 21 -721 838 bp Feature: gene Location: 723017-724305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723233-723482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723233-723482 bp Feature: gene Location: 724387-724749 bp Ori: API88421.1 Feature: domain Description: YtxH Location: 724396-724585 bp Feature: domain Description: YtxH Location: 724396-724585 bp Feature: domain Description: YtxH Location: 724594-724714 bp Feature: domain Description: YtxH Location: 724594-72471 4 bp Feature: gene Location: 725039-726358 bp Ori: API88422.1 Feature: domain Description: DDE_Tnp_1_4 Location: 725066-726347 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 725066-726347 bp Feature: gene Location: 1349055-1349660 bp Ori: API88939.1 Feature: domain Description: exosort_acyl Location: 1349103-1349364 bp Feature: domain Description: exosort_acyl Location: 1 3491 03-1 349364 bp Feature: domain Description: exosort_acyl Location: 1349388-1349640 bp Feature: domain Description: exosort_acyl Location: 1 349388-1 349640 bp Feature: gene Location: 1349663-1350421 bp Ori: API88940.1 Feature: domain Description: PRK08223 Location: 1349672-1350407 bp Feature: domain Description: PRK08223 Location: 1 349672-1 350407 bp Feature: gene Location: 1351157-1352446 bp Ori: API90281.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1351373-1351988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 351 373-1 351 988 bp Feature: domain Description: GIIM Note: maturase Location: 1352048-1352258 bp Feature: domain Description: GIIM Note: maturase Location: 1 352048-1 352258 bp Feature: gene Location: 1352670-1353596 bp Ori: API88941.1 Feature: domain Description: PRK06522 Location: 1352673-1353585 bp Feature: domain Description: PRK06522 Location: 1 352673-1 353585 bp Feature: gene Location: 1353690-1354871 bp Ori: API88942.1 Feature: domain Description: M20_Acy1-like Location: 1353738-1354854 bp Feature: domain Description: M20_Acy1 -like Location: 1 353738-1 354854 bp Feature: gene Location: 2408182-2408661 bp Ori: API90344.1 Feature: domain Description: PRK07308 Location: 2408224-2408647 bp Feature: domain Description: PRK07308 Location: 2408224-2408647 bp Feature: gene Location: 2408783-2409628 bp Ori: API89893.1 Feature: domain Description: ARA1 Location: 2408798-2409599 bp Feature: domain Description: ARA1 Location: 2408798-2409599 bp Feature: gene Location: 2409713-2411002 bp Ori: API90345.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409929-2410544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409929-241 0544 bp Feature: domain Description: GIIM Note: maturase Location: 2410604-2410814 bp Feature: domain Description: GIIM Note: maturase Location: 241 0604-241 081 4 bp Feature: gene Location: 2411557-2414280 bp Ori: API89894.1 Feature: domain Description: YfhO Location: 2411626-2414221 bp Feature: domain Description: YfhO Location: 241 1 626-241 4221 bp Feature: gene Location: 2414273-2414692 bp Ori: API90346.1 Feature: domain Description: GtrA Location: 2414315-2414666 bp Feature: domain Description: GtrA Location: 241 431 5-241 4666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), RVT-GII, YtxH (pfam12732), DDE_Tnp_1_4 (pfam13701), exosort_acyl (TIGR03694), PRK08223 (hypothetical protein; Validated), GIIM (pfam08388), PRK06522 (2-dehydropantoate 2-reductase; Reviewed)
M20_Acy1-like (cd08660), PRK07308 (flavodoxin; Validated), ARA1 (COG0656), YfhO (pfam09586), GtrA (pfam04138)