myRT

myRT report for GCA_001900395.1_ASM190039v1

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Seq: CP010151.1 Escherichia coli strain D8, complete genome (5130646 bp)
Overview 1 RT 1: 3645252-3651493 bp 2 RT 2: 3671505-3676030 bp Neighborhood of RT #1 [3645252, 3651493] DUF1427 YcaC_related RVT-GII GIIM InsG Transposase_20 Neighborhood of RT #2 [3671505, 3676053] FHA_bHelix Fil_haemagg FHA_bHelix RVT-GII PHA02517 HTH_23 InsE Feature: gene Location: 3645252-3645530 bp Ori: APK37130.1 Feature: domain Description: DUF1427 Location: 3645258-3645504 bp Feature: domain Description: DUF1 427 Location: 3645258-3645504 bp Feature: gene Location: 3645595-3646275 bp Ori: APK35615.1 Feature: domain Description: YcaC_related Location: 3645640-3646117 bp Feature: domain Description: YcaC_related Location: 3645640-36461 1 7 bp Feature: gene Location: 3648151-3649539 bp Ori: APK35616.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3648481-3649099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3648481 -3649099 bp Feature: domain Description: GIIM Note: maturase Location: 3649147-3649378 bp Feature: domain Description: GIIM Note: maturase Location: 36491 47-3649378 bp Feature: gene Location: 3649926-3651317 bp Ori: APK35617.1 Feature: domain Description: InsG Location: 3649929-3650850 bp Feature: domain Description: InsG Location: 3649929-3650850 bp Feature: domain Description: Transposase_20 Location: 3650973-3651219 bp Feature: domain Description: Transposase_20 Location: 3650973-3651 21 9 bp Feature: gene Location: 3651314-3651493 bp Feature: gene Location: 3671505-3672608 bp Ori: APK35631.1 Feature: domain Description: FHA_bHelix Location: 3671517-3671877 bp Feature: domain Description: FHA_bHelix Location: 3671 51 7-3671 877 bp Feature: domain Description: Fil_haemagg Location: 3671970-3672105 bp Feature: domain Description: Fil_haemagg Location: 3671 970-36721 05 bp Feature: domain Description: FHA_bHelix Location: 3672471-3672579 bp Feature: domain Description: FHA_bHelix Location: 3672471 -3672579 bp Feature: gene Location: 3672583-3672816 bp Feature: gene Location: 3674047-3674421 bp Ori: APK37136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3674053-3674224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3674053-3674224 bp Feature: gene Location: 3674816-3675064 bp Ori: APK35633.1 Feature: domain Description: PHA02517 Location: 3674825-3675008 bp Feature: domain Description: PHA0251 7 Location: 3674825-3675008 bp Feature: gene Location: 3675403-3676053 bp Ori: APK35634.1 Feature: domain Description: HTH_23 Location: 3675454-3675553 bp Feature: domain Description: HTH_23 Location: 3675454-3675553 bp Feature: domain Description: InsE Location: 3675679-3676030 bp Feature: domain Description: InsE Location: 3675679-3676030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1427 (pfam07235), YcaC_related (cd01012), RVT-GII, GIIM (pfam08388), InsG (COG3385), Transposase_20 (pfam02371), FHA_bHelix (sd00046), Fil_haemagg (pfam05594), PHA02517 (putative transposase OrfB; Reviewed), HTH_23 (pfam13384)
InsE (COG2963)