myRT

myRT report for GCA_001900635.1_ASM190063v1

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Seq: CP010140.1 Escherichia coli strain D3, complete genome (4971154 bp)
Overview 1 RT 1: 483931-486538 bp 2 RT 2: 2780916-2783326 bp 3 RT 3: 4563748-4567630 bp Neighborhood of RT #1 [483931, 486543] RVT-UG17 SLATT_5 PRK10597 Neighborhood of RT #2 [2780916, 2783352] RVT-GII PRK15434 GDP_FS_SDR_e Neighborhood of RT #3 [4563748, 4567635] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 483931-484065 bp Feature: gene Location: 484173-485543 bp Ori: APK09198.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 484401-485007 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 484401 -485007 bp Feature: gene Location: 485521-486072 bp Ori: APK09199.1 Feature: domain Description: SLATT_5 Location: 485527-486043 bp Feature: domain Description: SLATT_5 Location: 485527-486043 bp Feature: gene Location: 486295-486543 bp Ori: APK09200.1 Feature: domain Description: PRK10597 Location: 486298-486538 bp Feature: domain Description: PRK1 0597 Location: 486298-486538 bp Feature: gene Location: 2780916-2781209 bp Ori: APK11297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2781087-2781192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2781 087-2781 1 92 bp Feature: gene Location: 2781911-2782384 bp Ori: APK11298.1 Feature: domain Description: PRK15434 Location: 2781914-2782364 bp Feature: domain Description: PRK1 5434 Location: 2781 91 4-2782364 bp Feature: gene Location: 2782387-2783352 bp Ori: APK11299.1 Feature: domain Description: GDP_FS_SDR_e Location: 2782402-2783326 bp Feature: domain Description: GDP_FS_SDR_e Location: 2782402-2783326 bp Feature: gene Location: 4563748-4564206 bp Ori: APK12933.1 Feature: domain Description: dut Location: 4563754-4564201 bp Feature: domain Description: dut Location: 4563754-4564201 bp Feature: gene Location: 4564313-4564909 bp Ori: APK12934.1 Gene: slmA Feature: domain Description: slmA Location: 4564319-4564895 bp Feature: domain Description: slmA Location: 456431 9-4564895 bp Feature: gene Location: 4564955-4565914 bp Ori: APK12935.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4565090-4565639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4565090-4565639 bp Feature: gene Location: 4566212-4566853 bp Ori: APK12936.1 Gene: pyrE Feature: domain Description: pyrE Location: 4566215-4566848 bp Feature: domain Description: pyrE Location: 456621 5-4566848 bp Feature: gene Location: 4566919-4567635 bp Ori: APK12937.1 Gene: rph Feature: domain Description: rph Location: 4566922-4567630 bp Feature: domain Description: rph Location: 4566922-4567630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, PRK15434 (GDP-mannose mannosyl hydrolase), GDP_FS_SDR_e (cd05239), dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336)
rph (PRK00173)