myRT

myRT report for GCA_001901025.1_ASM190102v1

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Seq: CP010181.1 Escherichia coli strain M1 plasmid A, complete sequence (201930 bp)
Overview 1 RT 1: 187813-192360 bp Neighborhood of RT #1 [187813, 192431] PRK13699 RVT_N RVT-GII GIIM HNHc DUF1281 DUF1281_C Feature: gene Location: 187813-188034 bp Feature: gene Location: 188034-188666 bp Ori: APK96960.1 Feature: domain Description: PRK13699 Location: 188058-188664 bp Feature: domain Description: PRK1 3699 Location: 1 88058-1 88664 bp Feature: gene Location: 189267-190967 bp Ori: APK96932.1 Feature: domain Description: RVT_N Location: 189321-189564 bp Feature: domain Description: RVT_N Location: 1 89321 -1 89564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189609-190245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 89609-1 90245 bp Feature: domain Description: GIIM Note: maturase Location: 190296-190530 bp Feature: domain Description: GIIM Note: maturase Location: 1 90296-1 90530 bp Feature: domain Description: HNHc Note: nucleases Location: 190761-190911 bp Feature: domain Description: HNHc Note: nucleases Location: 1 90761 -1 9091 1 bp Feature: gene Location: 191197-191508 bp Feature: gene Location: 191505-192431 bp Ori: APK96934.1 Feature: domain Description: DUF1281 Location: 191598-192126 bp Feature: domain Description: DUF1 281 Location: 1 91 598-1 921 26 bp Feature: domain Description: DUF1281_C Location: 192132-192360 bp Feature: domain Description: DUF1 281 _C Location: 1 921 32-1 92360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP010180.1 Escherichia coli strain M1, complete genome (4941156 bp)
Overview 1 RT 1: 639326-644898 bp Neighborhood of RT #1 [639326, 644909] YeaL AraC_binding HTH_ARAC RVT_N RVT-GII GIIM HNHc YeaO Hlx Feature: gene Location: 639326-639772 bp Ori: APK92678.1 Feature: domain Description: YeaL Location: 639329-639770 bp Feature: domain Description: YeaL Location: 63932 9-639770 bp Feature: gene Location: 639729-640550 bp Ori: APK92679.1 Feature: domain Description: AraC_binding Location: 639795-640017 bp Feature: domain Description: AraC_binding Location: 639795-640017 bp Feature: domain Description: HTH_ARAC Location: 640257-640494 bp Feature: domain Description: HTH_ARAC Location: 6402 57-640494 bp Feature: gene Location: 640887-642587 bp Ori: APK92680.1 Feature: domain Description: RVT_N Location: 640941-641184 bp Feature: domain Description: RVT_N Location: 640941-641184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641229-641865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6412 2 9-641865 bp Feature: domain Description: GIIM Note: maturase Location: 641916-642150 bp Feature: domain Description: GIIM Note: maturase Location: 641916-642 150 bp Feature: domain Description: HNHc Note: nucleases Location: 642381-642531 bp Feature: domain Description: HNHc Note: nucleases Location: 642 381-642 531 bp Feature: gene Location: 644286-644633 bp Ori: APK92681.1 Feature: domain Description: YeaO Location: 644289-644628 bp Feature: domain Description: YeaO Location: 6442 89-64462 8 bp Feature: gene Location: 644655-644909 bp Ori: APK92682.1 Feature: domain Description: Hlx Location: 644658-644898 bp Feature: domain Description: Hlx Location: 644658-644898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaL (COG2707), AraC_binding (pfam02311), HTH_ARAC (smart00342), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YeaO (COG3189), Hlx (COG3042)