myRT

myRT report for GCA_001901045.1_ASM190104v1

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Seq: CP010184.1 Escherichia coli strain M3 plasmid A, complete sequence (200925 bp)
Overview 1 RT 1: 186812-191359 bp Neighborhood of RT #1 [186812, 191430] PRK13699 RVT_N RVT-GII GIIM HNHc DUF1281 DUF1281_C Feature: gene Location: 186812-187033 bp Feature: gene Location: 187033-187665 bp Ori: APL01819.1 Feature: domain Description: PRK13699 Location: 187057-187663 bp Feature: domain Description: PRK1 3699 Location: 1 87057-1 87663 bp Feature: gene Location: 188266-189966 bp Ori: APL01792.1 Feature: domain Description: RVT_N Location: 188320-188563 bp Feature: domain Description: RVT_N Location: 1 88320-1 88563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188608-189244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 88608-1 89244 bp Feature: domain Description: GIIM Note: maturase Location: 189295-189529 bp Feature: domain Description: GIIM Note: maturase Location: 1 89295-1 89529 bp Feature: domain Description: HNHc Note: nucleases Location: 189760-189910 bp Feature: domain Description: HNHc Note: nucleases Location: 1 89760-1 8991 0 bp Feature: gene Location: 190196-190507 bp Feature: gene Location: 190504-191430 bp Ori: APL01794.1 Feature: domain Description: DUF1281 Location: 190597-191125 bp Feature: domain Description: DUF1 281 Location: 1 90597-1 91 1 25 bp Feature: domain Description: DUF1281_C Location: 191131-191359 bp Feature: domain Description: DUF1 281 _C Location: 1 91 1 31 -1 91 359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP010183.1 Escherichia coli strain M3, complete genome (4940434 bp)
Overview 1 RT 1: 4287228-4292809 bp Neighborhood of RT #1 [4287228, 4292811] Hlx YeaO RVT_N RVT-GII GIIM HNHc AraC_binding HTH_ARAC YeaL Feature: gene Location: 4287228-4287482 bp Ori: APL00846.1 Feature: domain Description: Hlx Location: 4287231-4287471 bp Feature: domain Description: Hlx Location: 42 872 31-42 87471 bp Feature: gene Location: 4287504-4287851 bp Ori: APL00847.1 Feature: domain Description: YeaO Location: 4287507-4287846 bp Feature: domain Description: YeaO Location: 42 87507-42 87846 bp Feature: gene Location: 4289550-4291250 bp Ori: APL00848.1 Feature: domain Description: RVT_N Location: 4289604-4289847 bp Feature: domain Description: RVT_N Location: 42 89604-42 89847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4289892-4290528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 89892 -42 9052 8 bp Feature: domain Description: GIIM Note: maturase Location: 4290579-4290813 bp Feature: domain Description: GIIM Note: maturase Location: 42 90579-42 90813 bp Feature: domain Description: HNHc Note: nucleases Location: 4291044-4291194 bp Feature: domain Description: HNHc Note: nucleases Location: 42 91044-42 91194 bp Feature: gene Location: 4291587-4292408 bp Ori: APL00849.1 Feature: domain Description: AraC_binding Location: 4291653-4291875 bp Feature: domain Description: AraC_binding Location: 42 91653-42 91875 bp Feature: domain Description: HTH_ARAC Location: 4292115-4292352 bp Feature: domain Description: HTH_ARAC Location: 42 92 115-42 92 352 bp Feature: gene Location: 4292365-4292811 bp Ori: APL00850.1 Feature: domain Description: YeaL Location: 4292368-4292809 bp Feature: domain Description: YeaL Location: 42 92 368-42 92 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hlx (COG3042), YeaO (COG3189), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AraC_binding (pfam02311), HTH_ARAC (smart00342), YeaL (COG2707)