myRT

myRT report for GCA_001901185.1_ASM190118v1

Download annotations/find similar RTs

Seq: CP010219.1 Escherichia coli strain M18, complete genome (5102554 bp)
Overview 1 RT 1: 17763-27517 bp 2 RT 2: 1273753-1281890 bp 3 RT 3: 3948046-3953423 bp 4 RT 4: 5088438-5092984 bp Neighborhood of RT #1 [17763, 27517] PRK10005 PRK11468 RVT_N RVT-GII GIIM HNHc autotrans_barl Neighborhood of RT #2 [1273753, 1281898] PRK15286 PRK15285 RVT_N RVT-GII GIIM HNHc FimA PRK10848 Neighborhood of RT #3 [3948046, 3953443] TerD TerD RVT-GII GIIM TerD vWA-TerF-like InsE Neighborhood of RT #4 [5088438, 5093055] PRK13699 RVT_N RVT-GII GIIM HNHc DUF1281 DUF1281_C Feature: gene Location: 17763-18395 bp Ori: APL31250.1 Feature: domain Description: PRK10005 Location: 17766-18393 bp Feature: domain Description: PRK1 0005 Location: 1 7766-1 8393 bp Feature: gene Location: 18406-19476 bp Ori: APL31251.1 Feature: domain Description: PRK11468 Location: 18409-19474 bp Feature: domain Description: PRK1 1 468 Location: 1 8409-1 9474 bp Feature: gene Location: 20538-22238 bp Ori: APL31252.1 Feature: domain Description: RVT_N Location: 20592-20835 bp Feature: domain Description: RVT_N Location: 20592-20835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20880-21516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20880-21 51 6 bp Feature: domain Description: GIIM Note: maturase Location: 21567-21801 bp Feature: domain Description: GIIM Note: maturase Location: 21 567-21 801 bp Feature: domain Description: HNHc Note: nucleases Location: 22032-22182 bp Feature: domain Description: HNHc Note: nucleases Location: 22032-221 82 bp Feature: gene Location: 24126-26993 bp Ori: APL31253.1 Feature: domain Description: autotrans_barl Location: 25665-26991 bp Feature: domain Description: autotrans_barl Location: 25665-26991 bp Feature: gene Location: 27338-27517 bp Feature: gene Location: 1273753-1274259 bp Ori: APL32426.1 Feature: domain Description: PRK15286 Location: 1273819-1274257 bp Feature: domain Description: PRK1 5286 Location: 1 27381 9-1 274257 bp Feature: gene Location: 1274276-1275028 bp Ori: APL32427.1 Feature: domain Description: PRK15285 Location: 1274321-1275023 bp Feature: domain Description: PRK1 5285 Location: 1 274321 -1 275023 bp Feature: gene Location: 1276736-1278436 bp Ori: APL32428.1 Feature: domain Description: RVT_N Location: 1276790-1277033 bp Feature: domain Description: RVT_N Location: 1 276790-1 277033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277078-1277714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 277078-1 27771 4 bp Feature: domain Description: GIIM Note: maturase Location: 1277765-1277999 bp Feature: domain Description: GIIM Note: maturase Location: 1 277765-1 277999 bp Feature: domain Description: HNHc Note: nucleases Location: 1278230-1278380 bp Feature: domain Description: HNHc Note: nucleases Location: 1 278230-1 278380 bp Feature: gene Location: 1280175-1280738 bp Ori: APL32429.1 Feature: domain Description: FimA Location: 1280190-1280733 bp Feature: domain Description: FimA Location: 1 2801 90-1 280733 bp Feature: gene Location: 1281413-1281898 bp Ori: APL32430.1 Feature: domain Description: PRK10848 Location: 1281416-1281890 bp Feature: domain Description: PRK1 0848 Location: 1 281 41 6-1 281 890 bp Feature: gene Location: 3948046-3948624 bp Ori: APL34827.1 Feature: domain Description: TerD Location: 3948049-3948607 bp Feature: domain Description: TerD Location: 3948049-3948607 bp Feature: gene Location: 3948693-3949268 bp Ori: APL34828.1 Feature: domain Description: TerD Location: 3948696-3949254 bp Feature: domain Description: TerD Location: 3948696-3949254 bp Feature: gene Location: 3949770-3951158 bp Ori: APL34829.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3950100-3950718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39501 00-395071 8 bp Feature: domain Description: GIIM Note: maturase Location: 3950766-3950997 bp Feature: domain Description: GIIM Note: maturase Location: 3950766-3950997 bp Feature: gene Location: 3951619-3952860 bp Ori: APL34830.1 Feature: domain Description: TerD Location: 3951622-3952102 bp Feature: domain Description: TerD Location: 3951 622-39521 02 bp Feature: domain Description: vWA-TerF-like Location: 3952255-3952855 bp Feature: domain Description: vWA-TerF-like Location: 3952255-3952855 bp Feature: gene Location: 3953018-3953443 bp Ori: APL34831.1 Feature: domain Description: InsE Location: 3953033-3953423 bp Feature: domain Description: InsE Location: 3953033-3953423 bp Feature: gene Location: 5088438-5088659 bp Feature: gene Location: 5088659-5089219 bp Ori: APL35847.1 Feature: domain Description: PRK13699 Location: 5088662-5089217 bp Feature: domain Description: PRK1 3699 Location: 5088662-508921 7 bp Feature: gene Location: 5089891-5091591 bp Ori: APL35848.1 Feature: domain Description: RVT_N Location: 5089945-5090188 bp Feature: domain Description: RVT_N Location: 5089945-50901 88 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090233-5090869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090233-5090869 bp Feature: domain Description: GIIM Note: maturase Location: 5090920-5091154 bp Feature: domain Description: GIIM Note: maturase Location: 5090920-5091 1 54 bp Feature: domain Description: HNHc Note: nucleases Location: 5091385-5091535 bp Feature: domain Description: HNHc Note: nucleases Location: 5091 385-5091 535 bp Feature: gene Location: 5091821-5092132 bp Feature: gene Location: 5092129-5093055 bp Ori: APL35850.1 Feature: domain Description: DUF1281 Location: 5092222-5092750 bp Feature: domain Description: DUF1 281 Location: 5092222-5092750 bp Feature: domain Description: DUF1281_C Location: 5092756-5092984 bp Feature: domain Description: DUF1 281 _C Location: 5092756-5092984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10005 (dihydroxyacetone kinase ADP-binding subunit DhaL), PRK11468 (dihydroxyacetone kinase subunit DhaK; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), autotrans_barl (TIGR01414), PRK15286 (putative minor fimbrial subunit StfE; Provisional), PRK15285 (fimbrial chaperone StfD), FimA (pfam16970)
PRK10848 (phosphohistidine phosphatase SixA), TerD (pfam02342), vWA-TerF-like (pfam10138), InsE (COG2963), PRK13699 (putative methylase; Provisional), DUF1281 (pfam06924), DUF1281_C (pfam18406)