myRT

myRT report for GCA_001901315.1_ASM190131v1

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Seq: CP010226.1 Escherichia coli strain S1, complete genome (4702107 bp)
Overview 1 RT 1: 1836478-1840262 bp 2 RT 2: 3734744-3740062 bp Neighborhood of RT #1 [1836478, 1840262] Acetyltransf_10 COG4453 RVT-GII GIIM Neighborhood of RT #2 [3734744, 3740062] InsE PHA02517 RVT-GII GIIM COG3547 Feature: gene Location: 1836478-1837008 bp Ori: APL42809.1 Feature: domain Description: Acetyltransf_10 Location: 1836754-1836946 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 836754-1 836946 bp Feature: gene Location: 1837012-1837281 bp Ori: APL42810.1 Feature: domain Description: COG4453 Location: 1837018-1837273 bp Feature: domain Description: COG4453 Location: 1 83701 8-1 837273 bp Feature: gene Location: 1838074-1839582 bp Ori: APL45445.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1838332-1839064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 838332-1 839064 bp Feature: domain Description: GIIM Note: maturase Location: 1839139-1839337 bp Feature: domain Description: GIIM Note: maturase Location: 1 8391 39-1 839337 bp Feature: gene Location: 1839551-1839976 bp Feature: gene Location: 1839891-1840262 bp Feature: gene Location: 3734744-3735028 bp Ori: APL44522.1 Feature: domain Description: InsE Location: 3734759-3735017 bp Feature: domain Description: InsE Location: 3734759-373501 7 bp Feature: gene Location: 3735070-3735495 bp Ori: APL44523.1 Feature: domain Description: PHA02517 Location: 3735091-3735430 bp Feature: domain Description: PHA0251 7 Location: 3735091 -3735430 bp Feature: gene Location: 3736102-3737610 bp Ori: APL45531.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736360-3737092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736360-3737092 bp Feature: domain Description: GIIM Note: maturase Location: 3737167-3737365 bp Feature: domain Description: GIIM Note: maturase Location: 37371 67-3737365 bp Feature: gene Location: 3738152-3739228 bp Ori: APL44524.1 Feature: domain Description: COG3547 Location: 3738191-3739112 bp Feature: domain Description: COG3547 Location: 37381 91 -37391 1 2 bp Feature: gene Location: 3739718-3740062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), COG4453 (Uncharacterized conserved protein, DUF1778 family ), RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase )