myRT

myRT report for GCA_001901365.1_ASM190136v1

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Seq: CP010231.1 Escherichia coli strain S30, complete genome (4664102 bp)
Overview 1 RT 1: 3930975-3936506 bp 2 RT 2: 4223770-4229435 bp Neighborhood of RT #1 [3930975, 3936506] Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-Retrons TIR_2 PRK10597 Neighborhood of RT #2 [4223770, 4229503] proA PRK09692 RVT-UG15 Psu PRK09678 Feature: gene Location: 3930975-3932960 bp Ori: APL63446.1 Feature: domain Description: Phage_fiber_2 Location: 3930996-3931116 bp Feature: domain Description: Phage_fiber_2 Location: 3930996-3931 1 1 6 bp Feature: domain Description: Collar Location: 3932331-3932469 bp Feature: domain Description: Collar Location: 3932331 -3932469 bp Feature: domain Description: Phage_fiber Location: 3932520-3932559 bp Feature: domain Description: Phage_fiber Location: 3932520-3932559 bp Feature: domain Description: Phage_fiber Location: 3932616-3932655 bp Feature: domain Description: Phage_fiber Location: 393261 6-3932655 bp Feature: domain Description: Phage_fiber Location: 3932661-3932688 bp Feature: domain Description: Phage_fiber Location: 3932661 -3932688 bp Feature: domain Description: Phage_fiber Location: 3932763-3932802 bp Feature: domain Description: Phage_fiber Location: 3932763-3932802 bp Feature: domain Description: Phage_fiber Location: 3932808-3932841 bp Feature: domain Description: Phage_fiber Location: 3932808-3932841 bp Feature: gene Location: 3932960-3933544 bp Ori: APL62623.1 Feature: domain Description: Caudo_TAP Location: 3933176-3933533 bp Feature: domain Description: Caudo_TAP Location: 39331 76-3933533 bp Feature: gene Location: 3933989-3935593 bp Ori: APL62624.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3934280-3934871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3934280-3934871 bp Feature: domain Description: TIR_2 Location: 3935198-3935486 bp Feature: domain Description: TIR_2 Location: 39351 98-3935486 bp Feature: gene Location: 3935953-3936213 bp Ori: APL62625.1 Feature: domain Description: PRK10597 Location: 3935956-3936196 bp Feature: domain Description: PRK1 0597 Location: 3935956-39361 96 bp Feature: gene Location: 3936297-3936506 bp Feature: gene Location: 4223770-4225023 bp Ori: APL62883.1 Feature: domain Description: proA Location: 4223797-4224988 bp Feature: domain Description: proA Location: 4223797-4224988 bp Feature: gene Location: 4225377-4226543 bp Ori: APL62884.1 Feature: domain Description: PRK09692 Location: 4225383-4226526 bp Feature: domain Description: PRK09692 Location: 4225383-4226526 bp Feature: gene Location: 4226559-4228175 bp Ori: APL62885.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 4226970-4227393 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 4226970-4227393 bp Feature: gene Location: 4228680-4229243 bp Ori: APL62886.1 Feature: domain Description: Psu Location: 4228698-4229238 bp Feature: domain Description: Psu Location: 4228698-4229238 bp Feature: gene Location: 4229240-4229503 bp Ori: APL62887.1 Feature: domain Description: PRK09678 Location: 4229243-4229435 bp Feature: domain Description: PRK09678 Location: 4229243-4229435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), Caudo_TAP (pfam02413), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG15
Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)