myRT

myRT report for GCA_001902195.1_ASM190219v1

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Seq: CP018428.1 Klebsiella pneumoniae strain MNCRE78 chromosome, complete genome (5454003 bp)
Overview 1 RT 1: 1335200-1338607 bp 2 RT 2: 1680884-1694164 bp 3 RT 3: 2025295-2030713 bp 4 RT 4: 2203621-2208776 bp 5 RT 5: 3555553-3562036 bp 6 RT 6: 4175307-4180968 bp Neighborhood of RT #1 [1335200, 1338708] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1680884, 1694169] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C dam Phage_GPA RVT-GII DinI Neighborhood of RT #3 [2025295, 2030715] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2203621, 2208778] PinE XerC RVT-GII PRK10276 umuC Neighborhood of RT #5 [3555553, 3562038] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [4175307, 4181045] DinI RVT-GII Phage_GPA dam Feature: gene Location: 1335200-1335931 bp Ori: APM07482.1 Feature: domain Description: Laminin_G_3 Location: 1335521-1335875 bp Feature: domain Description: Laminin_G_3 Location: 1 335521 -1 335875 bp Feature: gene Location: 1335928-1336137 bp Feature: gene Location: 1336590-1338074 bp Ori: APM07484.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336992-1337682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 336992-1 337682 bp Feature: gene Location: 1338152-1338391 bp Feature: gene Location: 1338391-1338708 bp Ori: APM07486.1 Feature: domain Description: PRK10276 Location: 1338397-1338511 bp Feature: domain Description: PRK1 0276 Location: 1 338397-1 33851 1 bp Feature: domain Description: PRK10276 Location: 1338538-1338607 bp Feature: domain Description: PRK1 0276 Location: 1 338538-1 338607 bp Feature: gene Location: 1680884-1681447 bp Ori: APM07802.1 Feature: domain Description: YbjK Location: 1680890-1681427 bp Feature: domain Description: YbjK Location: 1 680890-1 681 427 bp Feature: gene Location: 1681570-1682622 bp Ori: APM07803.1 Feature: domain Description: int Location: 1681573-1682572 bp Feature: domain Description: int Location: 1 681 573-1 682572 bp Feature: gene Location: 1683041-1684525 bp Ori: APM07804.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1683443-1684133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 683443-1 6841 33 bp Feature: gene Location: 1684624-1685568 bp Feature: gene Location: 1685580-1686458 bp Ori: APM07806.1 Feature: domain Description: Phage_CI_repr Location: 1685607-1685790 bp Feature: domain Description: Phage_CI_repr Location: 1 685607-1 685790 bp Feature: domain Description: Phage_CI_repr Location: 1685919-1686111 bp Feature: domain Description: Phage_CI_repr Location: 1 68591 9-1 6861 1 1 bp Feature: domain Description: Phage_CI_C Location: 1686138-1686432 bp Feature: domain Description: Phage_CI_C Location: 1 6861 38-1 686432 bp Feature: gene Location: 1688405-1689262 bp Ori: APM07812.1 Feature: domain Description: dam Location: 1688408-1689185 bp Feature: domain Description: dam Location: 1 688408-1 6891 85 bp Feature: gene Location: 1689259-1691673 bp Ori: APM07813.1 Feature: domain Description: Phage_GPA Location: 1689823-1690789 bp Feature: domain Description: Phage_GPA Location: 1 689823-1 690789 bp Feature: gene Location: 1692152-1693636 bp Ori: APM07814.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1692554-1693244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 692554-1 693244 bp Feature: gene Location: 1693737-1693925 bp Feature: gene Location: 1693936-1694169 bp Ori: APM07816.1 Feature: domain Description: DinI Location: 1693978-1694164 bp Feature: domain Description: DinI Location: 1 693978-1 6941 64 bp Feature: gene Location: 2025295-2026434 bp Ori: APM08134.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2025478-2026378 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2025478-2026378 bp Feature: gene Location: 2026605-2026847 bp Ori: APM08135.1 Feature: domain Description: DinI Location: 2026656-2026836 bp Feature: domain Description: DinI Location: 2026656-2026836 bp Feature: gene Location: 2027465-2028949 bp Ori: APM08136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2027867-2028557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2027867-2028557 bp Feature: gene Location: 2029028-2029447 bp Ori: APM08137.1 Feature: domain Description: PRK10276 Location: 2029031-2029442 bp Feature: domain Description: PRK1 0276 Location: 2029031 -2029442 bp Feature: gene Location: 2029450-2030715 bp Ori: APM08138.1 Feature: domain Description: umuC Location: 2029453-2030713 bp Feature: domain Description: umuC Location: 2029453-203071 3 bp Feature: gene Location: 2203621-2204130 bp Ori: APM08320.1 Feature: domain Description: PinE Location: 2203669-2204122 bp Feature: domain Description: PinE Location: 2203669-22041 22 bp Feature: gene Location: 2204208-2204630 bp Ori: APM08321.1 Feature: domain Description: XerC Location: 2204244-2204589 bp Feature: domain Description: XerC Location: 2204244-2204589 bp Feature: gene Location: 2205528-2207012 bp Ori: APM08322.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205930-2206620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205930-2206620 bp Feature: gene Location: 2207092-2207511 bp Ori: APM11529.1 Feature: domain Description: PRK10276 Location: 2207095-2207506 bp Feature: domain Description: PRK1 0276 Location: 2207095-2207506 bp Feature: gene Location: 2207513-2208778 bp Ori: APM08323.1 Feature: domain Description: umuC Location: 2207516-2208776 bp Feature: domain Description: umuC Location: 220751 6-2208776 bp Feature: gene Location: 3555553-3556611 bp Ori: APM09608.1 Feature: domain Description: YccC Location: 3555559-3556597 bp Feature: domain Description: YccC Location: 3555559-3556597 bp Feature: gene Location: 3556710-3557183 bp Ori: APM09609.1 Feature: domain Description: PRK10016 Location: 3556713-3557172 bp Feature: domain Description: PRK1 001 6 Location: 355671 3-35571 72 bp Feature: gene Location: 3557265-3558749 bp Ori: APM09610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3557667-3558357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3557667-3558357 bp Feature: gene Location: 3559270-3560433 bp Ori: APM11599.1 Feature: domain Description: dacD Location: 3559273-3560428 bp Feature: domain Description: dacD Location: 3559273-3560428 bp Feature: gene Location: 3560614-3562038 bp Ori: APM09611.1 Feature: domain Description: SbcB Location: 3560620-3562036 bp Feature: domain Description: SbcB Location: 3560620-3562036 bp Feature: gene Location: 4175307-4175540 bp Ori: APM10167.1 Feature: domain Description: DinI Location: 4175352-4175535 bp Feature: domain Description: DinI Location: 41 75352-41 75535 bp Feature: gene Location: 4175552-4175740 bp Feature: gene Location: 4175848-4177332 bp Ori: APM10169.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176250-4176940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 76250-41 76940 bp Feature: gene Location: 4177813-4180197 bp Ori: APM10170.1 Feature: domain Description: Phage_GPA Location: 4178377-4179343 bp Feature: domain Description: Phage_GPA Location: 41 78377-41 79343 bp Feature: gene Location: 4180194-4181045 bp Ori: APM10171.1 Feature: domain Description: dam Location: 4180197-4180968 bp Feature: domain Description: dam Location: 41 801 97-41 80968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), PinE (COG1961), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: CP018429.1 Klebsiella pneumoniae strain MNCRE78 plasmid pMNCRE78_2, complete sequence (45288 bp)
Overview 1 RT 1: 38785-43069 bp Neighborhood of RT #1 [38785, 43083] PHA02518 SR_Res_par HTH_Hin_like RVT-GII PRK10276 Feature: gene Location: 38785-39447 bp Ori: APM11712.1 Feature: domain Description: PHA02518 Location: 38794-39418 bp Feature: domain Description: PHA02 518 Location: 38794-39418 bp Feature: gene Location: 39828-40490 bp Ori: APM11721.1 Feature: domain Description: SR_Res_par Location: 39858-40287 bp Feature: domain Description: SR_Res_par Location: 39858-402 87 bp Feature: domain Description: HTH_Hin_like Location: 40350-40437 bp Feature: domain Description: HTH_Hin_like Location: 40350-40437 bp Feature: gene Location: 41089-42405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41413-42013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41413-42 013 bp Feature: gene Location: 42485-42724 bp Feature: gene Location: 42727-43083 bp Ori: APM11713.1 Feature: domain Description: PRK10276 Location: 42733-43069 bp Feature: domain Description: PRK102 76 Location: 42 733-43069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02518 (ParA-like protein; Provisional), SR_Res_par (cd03767), HTH_Hin_like (cd00569), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP018430.1 Klebsiella pneumoniae strain MNCRE78 plasmid pMNCRE78_4, complete sequence (208225 bp)
Overview 1 RT 1: 102783-107777 bp Neighborhood of RT #1 [102783, 107779] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 102783-104054 bp Ori: APM11823.1 Feature: domain Description: umuC Location: 102786-104049 bp Feature: domain Description: umuC Location: 102786-104049 bp Feature: gene Location: 104054-104479 bp Ori: APM11824.1 Feature: domain Description: PRK10276 Location: 104057-104465 bp Feature: domain Description: PRK10276 Location: 104057-104465 bp Feature: gene Location: 104885-106369 bp Ori: APM11825.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105287-105977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105287-105977 bp Feature: gene Location: 106603-106833 bp Feature: gene Location: 107354-107779 bp Ori: APM11827.1 Feature: domain Description: Antirestrict Location: 107489-107777 bp Feature: domain Description: Antirestrict Location: 107489-107777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)