myRT

myRT report for GCA_001902255.1_ASM190225v1

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Seq: CP018354.1 Klebsiella pneumoniae strain CAV1453 plasmid pCAV1453-46, complete sequence (45742 bp)
Overview 1 RT 1: 39141-43577 bp Neighborhood of RT #1 [39141, 43585] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 39141-39644 bp Ori: APM23522.1 Feature: domain Description: DDE_Tnp_IS1 Location: 39252-39642 bp Feature: domain Description: DDE_Tnp_IS1 Location: 39252-39642 bp Feature: gene Location: 39563-39838 bp Ori: APM23523.1 Feature: domain Description: InsA Location: 39569-39830 bp Feature: domain Description: InsA Location: 39569-39830 bp Feature: gene Location: 39990-41474 bp Ori: APM23524.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40392-41082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40392-41 082 bp Feature: gene Location: 41883-42314 bp Ori: APM23525.1 Feature: domain Description: PRK10276 Location: 41934-42297 bp Feature: domain Description: PRK1 0276 Location: 41 934-42297 bp Feature: gene Location: 42314-43585 bp Ori: APM23526.1 Feature: domain Description: umuC Location: 42317-43577 bp Feature: domain Description: umuC Location: 4231 7-43577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP018356.1 Klebsiella pneumoniae strain CAV1453 chromosome, complete genome (5327855 bp)
Overview 1 RT 1: 968447-973995 bp 2 RT 2: 1355122-1360540 bp 3 RT 3: 2712705-2719188 bp Neighborhood of RT #1 [968447, 974021] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1355122, 1360542] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2712705, 2719190] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 968447-969010 bp Ori: APM24665.1 Feature: domain Description: YbjK Location: 968453-968990 bp Feature: domain Description: YbjK Location: 968453-968990 bp Feature: gene Location: 969133-970185 bp Ori: APM24666.1 Feature: domain Description: int Location: 969136-970135 bp Feature: domain Description: int Location: 969136-970135 bp Feature: gene Location: 970604-972088 bp Ori: APM24667.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971006-971696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971006-971696 bp Feature: gene Location: 972187-973131 bp Feature: gene Location: 973143-974021 bp Ori: APM24669.1 Feature: domain Description: Phage_CI_repr Location: 973170-973353 bp Feature: domain Description: Phage_CI_repr Location: 973170-973353 bp Feature: domain Description: Phage_CI_repr Location: 973482-973674 bp Feature: domain Description: Phage_CI_repr Location: 973482 -973674 bp Feature: domain Description: Phage_CI_C Location: 973701-973995 bp Feature: domain Description: Phage_CI_C Location: 973701-973995 bp Feature: gene Location: 1355122-1356261 bp Ori: APM25044.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1355305-1356205 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1355305-13562 05 bp Feature: gene Location: 1356432-1356674 bp Ori: APM25045.1 Feature: domain Description: DinI Location: 1356483-1356663 bp Feature: domain Description: DinI Location: 1356483-1356663 bp Feature: gene Location: 1357292-1358776 bp Ori: APM25046.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357694-1358384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357694-1358384 bp Feature: gene Location: 1358855-1359274 bp Ori: APM25047.1 Feature: domain Description: PRK10276 Location: 1358858-1359269 bp Feature: domain Description: PRK102 76 Location: 1358858-13592 69 bp Feature: gene Location: 1359277-1360542 bp Ori: APM25048.1 Feature: domain Description: umuC Location: 1359280-1360540 bp Feature: domain Description: umuC Location: 13592 80-1360540 bp Feature: gene Location: 2712705-2713763 bp Ori: APM26393.1 Feature: domain Description: YccC Location: 2712711-2713749 bp Feature: domain Description: YccC Location: 2 712 711-2 713749 bp Feature: gene Location: 2713862-2714335 bp Ori: APM26394.1 Feature: domain Description: PRK10016 Location: 2713865-2714324 bp Feature: domain Description: PRK10016 Location: 2 713865-2 71432 4 bp Feature: gene Location: 2714417-2715901 bp Ori: APM26395.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2714819-2715509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 714819-2 715509 bp Feature: gene Location: 2716422-2717585 bp Ori: APM29018.1 Feature: domain Description: dacD Location: 2716425-2717580 bp Feature: domain Description: dacD Location: 2 71642 5-2 717580 bp Feature: gene Location: 2717766-2719190 bp Ori: APM26396.1 Feature: domain Description: SbcB Location: 2717772-2719188 bp Feature: domain Description: SbcB Location: 2 717772 -2 719188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: CP018355.1 Klebsiella pneumoniae strain CAV1453 plasmid pCAV1453-208, complete sequence (207543 bp)
Overview 1 RT 1: 41517-46511 bp Neighborhood of RT #1 [41517, 46513] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 41517-42788 bp Ori: APM23568.1 Feature: domain Description: umuC Location: 41520-42783 bp Feature: domain Description: umuC Location: 41520-42783 bp Feature: gene Location: 42788-43213 bp Ori: APM23569.1 Feature: domain Description: PRK10276 Location: 42791-43199 bp Feature: domain Description: PRK10276 Location: 42791-43 199 bp Feature: gene Location: 43619-45103 bp Ori: APM23570.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44021-44711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44021-44711 bp Feature: gene Location: 45337-45567 bp Feature: gene Location: 46088-46513 bp Ori: APM23572.1 Feature: domain Description: Antirestrict Location: 46223-46511 bp Feature: domain Description: Antirestrict Location: 46223 -46511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)