myRT

myRT report for GCA_001902335.1_ASM190233v1

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Seq: CP018339.1 Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence (204862 bp)
Overview 1 RT 1: 71328-77919 bp 2 RT 2: 188253-193259 bp Neighborhood of RT #1 [71328, 77919] umuC PRK10276 RVT-GII cas7_csf2 Neighborhood of RT #2 [188253, 193259] INT_Cre_C RVT-GII HHA Feature: gene Location: 71328-72599 bp Ori: APM46727.1 Feature: domain Description: umuC Location: 71331-72591 bp Feature: domain Description: umuC Location: 71 331 -72591 bp Feature: gene Location: 72599-73021 bp Ori: APM46728.1 Feature: domain Description: PRK10276 Location: 72605-73007 bp Feature: domain Description: PRK1 0276 Location: 72605-73007 bp Feature: gene Location: 73107-74591 bp Ori: APM46729.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73509-74199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73509-741 99 bp Feature: gene Location: 76176-76967 bp Ori: APM46730.1 Feature: domain Description: cas7_csf2 Location: 76497-76911 bp Feature: domain Description: cas7_csf2 Location: 76497-7691 1 bp Feature: gene Location: 77212-77919 bp Feature: gene Location: 188253-188570 bp Feature: gene Location: 188636-189772 bp Ori: APM46848.1 Feature: domain Description: INT_Cre_C Location: 189059-189713 bp Feature: domain Description: INT_Cre_C Location: 1 89059-1 8971 3 bp Feature: gene Location: 189858-191342 bp Ori: APM46849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190260-190950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90260-1 90950 bp Feature: gene Location: 191858-192112 bp Ori: APM46850.1 Feature: domain Description: HHA Location: 191909-192092 bp Feature: domain Description: HHA Location: 1 91 909-1 92092 bp Feature: gene Location: 192198-193259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, cas7_csf2 (TIGR03115), INT_Cre_C (cd00799), HHA (pfam05321)

Seq: CP018338.1 Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-2, complete sequence (202175 bp)
Overview 1 RT 1: 178189-181996 bp Neighborhood of RT #1 [178189, 182050] INT_Cre_C RVT-GII HHA Feature: gene Location: 178189-178506 bp Feature: gene Location: 178572-179708 bp Ori: APM46627.1 Feature: domain Description: INT_Cre_C Location: 178995-179649 bp Feature: domain Description: INT_Cre_C Location: 178995-179649 bp Feature: gene Location: 179794-181278 bp Ori: APM46628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180196-180886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180196-180886 bp Feature: gene Location: 181578-181763 bp Feature: gene Location: 181795-182050 bp Feature: domain Description: HHA Location: 181846-181996 bp Feature: domain Description: HHA Location: 181846-181996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: CP018340.1 Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-3, complete sequence (81939 bp)
Overview 1 RT 1: 57977-62971 bp Neighborhood of RT #1 [57977, 62973] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 57977-59248 bp Ori: APM46948.1 Feature: domain Description: umuC Location: 57980-59243 bp Feature: domain Description: umuC Location: 57980-59243 bp Feature: gene Location: 59248-59673 bp Ori: APM46949.1 Feature: domain Description: PRK10276 Location: 59251-59659 bp Feature: domain Description: PRK10276 Location: 59251-59659 bp Feature: gene Location: 60079-61563 bp Ori: APM46950.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60481-61171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60481-61171 bp Feature: gene Location: 61797-62027 bp Feature: gene Location: 62548-62973 bp Ori: APM46952.1 Feature: domain Description: Antirestrict Location: 62683-62971 bp Feature: domain Description: Antirestrict Location: 62683 -62971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP018337.1 Klebsiella pneumoniae isolate Kp_Goe_154414 chromosome, complete genome (5159815 bp)
Overview 1 RT 1: 1801063-1807191 bp 2 RT 2: 2955999-2961186 bp 3 RT 3: 3126785-3132148 bp Neighborhood of RT #1 [1801063, 1807191] RVT-Retrons AAA_15 Neighborhood of RT #2 [2955999, 2961194] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #3 [3126785, 3132204] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 1801063-1801931 bp Feature: gene Location: 1801951-1802133 bp Feature: gene Location: 1802587-1803687 bp Ori: APM43126.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1802770-1803298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1802770-1803298 bp Feature: gene Location: 1803802-1806048 bp Ori: APM43127.1 Feature: domain Description: AAA_15 Location: 1803805-1804813 bp Feature: domain Description: AAA_15 Location: 1803805-1804 813 bp Feature: gene Location: 1806961-1807191 bp Feature: gene Location: 2955999-2957264 bp Ori: APM44216.1 Feature: domain Description: umuC Location: 2956002-2957262 bp Feature: domain Description: umuC Location: 2956002-2957262 bp Feature: gene Location: 2957266-2957685 bp Ori: APM46376.1 Feature: domain Description: PRK10276 Location: 2957269-2957680 bp Feature: domain Description: PRK10276 Location: 2957269-2957680 bp Feature: gene Location: 2957765-2959249 bp Ori: APM44217.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958167-2958857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958167-2958857 bp Feature: gene Location: 2960146-2960568 bp Ori: APM44218.1 Feature: domain Description: XerC Location: 2960182-2960527 bp Feature: domain Description: XerC Location: 2960182-2960527 bp Feature: gene Location: 2960646-2961194 bp Ori: APM44219.1 Feature: domain Description: PinE Location: 2960655-2961186 bp Feature: domain Description: PinE Location: 2960655-2961186 bp Feature: gene Location: 3126785-3128050 bp Ori: APM44395.1 Feature: domain Description: umuC Location: 3126788-3128048 bp Feature: domain Description: umuC Location: 3126788-312804 8 bp Feature: gene Location: 3128053-3128472 bp Ori: APM44396.1 Feature: domain Description: PRK10276 Location: 3128056-3128467 bp Feature: domain Description: PRK10276 Location: 3128056-31284 67 bp Feature: gene Location: 3128551-3130035 bp Ori: APM44397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3128953-3129643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3128953-312964 3 bp Feature: gene Location: 3130652-3130894 bp Ori: APM44398.1 Feature: domain Description: DinI Location: 3130703-3130883 bp Feature: domain Description: DinI Location: 3130703-3130883 bp Feature: gene Location: 3131065-3132204 bp Ori: APM44399.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3131248-3132148 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 313124 8-313214 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, XerC (COG4973), PinE (COG1961), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)