myRT

myRT report for GCA_001902395.1_ASM190239v1

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Seq: CP018458.1 Klebsiella pneumoniae strain Kp_Goe_39795, complete genome (5330835 bp)
Overview 1 RT 1: 779440-783187 bp 2 RT 2: 823274-830622 bp 3 RT 3: 3227328-3232692 bp Neighborhood of RT #1 [779440, 783201] RVT-GII GIIM PHA02517 fghA_ester_D Neighborhood of RT #2 [823274, 830672] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #3 [3227328, 3232748] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 779440-779811 bp Feature: gene Location: 779726-780151 bp Feature: gene Location: 780120-781628 bp Ori: APM61836.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780378-781110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780378-781 1 1 0 bp Feature: domain Description: GIIM Note: maturase Location: 781185-781383 bp Feature: domain Description: GIIM Note: maturase Location: 781 1 85-781 383 bp Feature: gene Location: 781709-782165 bp Feature: domain Description: PHA02517 Location: 781712-782063 bp Feature: domain Description: PHA0251 7 Location: 781 71 2-782063 bp Feature: gene Location: 782365-783201 bp Ori: APM57570.1 Feature: domain Description: fghA_ester_D Location: 782371-783187 bp Feature: domain Description: fghA_ester_D Location: 782371 -7831 87 bp Feature: gene Location: 823274-824038 bp Ori: APM57610.1 Feature: domain Description: FimC Location: 823319-824021 bp Feature: domain Description: FimC Location: 82331 9-824021 bp Feature: gene Location: 824085-826679 bp Ori: APM57611.1 Feature: domain Description: FimD Location: 824127-826668 bp Feature: domain Description: FimD Location: 8241 27-826668 bp Feature: gene Location: 826676-828757 bp Ori: APM57612.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 827087-827531 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 827087-827531 bp Feature: gene Location: 828799-829254 bp Ori: APM57613.1 Feature: domain Description: Integrase_1 Location: 828802-829036 bp Feature: domain Description: Integrase_1 Location: 828802-829036 bp Feature: gene Location: 829434-830672 bp Feature: domain Description: PRK09692 Location: 829440-830622 bp Feature: domain Description: PRK09692 Location: 829440-830622 bp Feature: gene Location: 3227328-3228593 bp Ori: APM59897.1 Feature: domain Description: umuC Location: 3227331-3228591 bp Feature: domain Description: umuC Location: 3227331 -3228591 bp Feature: gene Location: 3228596-3229015 bp Ori: APM59898.1 Feature: domain Description: PRK10276 Location: 3228599-3229010 bp Feature: domain Description: PRK1 0276 Location: 3228599-322901 0 bp Feature: gene Location: 3229094-3230578 bp Ori: APM59899.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3229496-3230186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3229496-32301 86 bp Feature: gene Location: 3231196-3231438 bp Ori: APM59900.1 Feature: domain Description: DinI Location: 3231247-3231427 bp Feature: domain Description: DinI Location: 3231 247-3231 427 bp Feature: gene Location: 3231609-3232748 bp Ori: APM59901.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3231792-3232692 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3231 792-3232692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), fghA_ester_D (TIGR02821), FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)

Seq: CP018460.1 Klebsiella pneumoniae strain Kp_Goe_39795 plasmid pKp_Goe_795-1, complete sequence (232181 bp)
Overview 1 RT 1: 124575-129569 bp Neighborhood of RT #1 [124575, 129571] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 124575-125846 bp Ori: APM62173.1 Feature: domain Description: umuC Location: 124578-125841 bp Feature: domain Description: umuC Location: 12 4578-12 5841 bp Feature: gene Location: 125846-126271 bp Ori: APM62174.1 Feature: domain Description: PRK10276 Location: 125849-126257 bp Feature: domain Description: PRK102 76 Location: 12 5849-12 62 57 bp Feature: gene Location: 126677-128161 bp Ori: APM62175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127079-127769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7079-12 7769 bp Feature: gene Location: 128395-128625 bp Feature: gene Location: 129146-129571 bp Ori: APM62177.1 Feature: domain Description: Antirestrict Location: 129281-129569 bp Feature: domain Description: Antirestrict Location: 12 92 81-12 9569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)