myRT

myRT report for GCA_001902415.1_ASM190241v1

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Seq: CP018441.1 Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-1, complete sequence (180027 bp)
Overview 1 RT 1: 150876-155867 bp Neighborhood of RT #1 [150876, 155872] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 150876-151301 bp Ori: APM67865.1 Feature: domain Description: Antirestrict Location: 151011-151299 bp Feature: domain Description: Antirestrict Location: 1 51 01 1 -1 51 299 bp Feature: gene Location: 151822-152052 bp Feature: gene Location: 152286-153770 bp Ori: APM67867.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152688-153378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 52688-1 53378 bp Feature: gene Location: 154176-154601 bp Ori: APM67868.1 Feature: domain Description: PRK10276 Location: 154179-154587 bp Feature: domain Description: PRK1 0276 Location: 1 541 79-1 54587 bp Feature: gene Location: 154601-155872 bp Ori: APM67869.1 Feature: domain Description: umuC Location: 154604-155867 bp Feature: domain Description: umuC Location: 1 54604-1 55867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP018438.1 Klebsiella pneumoniae strain Kp_Goe_822917, complete sequence (5294741 bp)
Overview 1 RT 1: 1803435-1809564 bp 2 RT 2: 3176548-3181912 bp 3 RT 3: 3926522-3929974 bp Neighborhood of RT #1 [1803435, 1809564] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Neighborhood of RT #2 [3176548, 3181968] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3926522, 3930030] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1803435-1804304 bp Ori: APM64145.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1803957-1804128 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1803957-180412 8 bp Feature: gene Location: 1804324-1804506 bp Feature: gene Location: 1804960-1806060 bp Ori: APM64146.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1805140-1805674 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1805140-1805674 bp Feature: gene Location: 1806175-1808421 bp Ori: APM64147.1 Feature: domain Description: AAA_15 Location: 1806178-1807186 bp Feature: domain Description: AAA_15 Location: 1806178-1807186 bp Feature: gene Location: 1809334-1809564 bp Feature: gene Location: 3176548-3177813 bp Ori: APM65483.1 Feature: domain Description: umuC Location: 3176551-3177811 bp Feature: domain Description: umuC Location: 3176551-3177811 bp Feature: gene Location: 3177816-3178235 bp Ori: APM65484.1 Feature: domain Description: PRK10276 Location: 3177819-3178230 bp Feature: domain Description: PRK102 76 Location: 3177819-31782 30 bp Feature: gene Location: 3178314-3179798 bp Ori: APM65485.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3178716-3179406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3178716-3179406 bp Feature: gene Location: 3180416-3180658 bp Ori: APM65486.1 Feature: domain Description: DinI Location: 3180467-3180647 bp Feature: domain Description: DinI Location: 3180467-3180647 bp Feature: gene Location: 3180829-3181968 bp Ori: APM65487.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3181012-3181912 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3181012 -3181912 bp Feature: gene Location: 3926522-3926839 bp Ori: APM66185.1 Feature: domain Description: PRK10276 Location: 3926528-3926642 bp Feature: domain Description: PRK102 76 Location: 392 652 8-392 6642 bp Feature: domain Description: PRK10276 Location: 3926669-3926738 bp Feature: domain Description: PRK102 76 Location: 392 6669-392 6738 bp Feature: gene Location: 3926839-3927078 bp Feature: gene Location: 3927156-3928640 bp Ori: APM66187.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3927558-3928248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 7558-392 82 48 bp Feature: gene Location: 3929093-3929302 bp Feature: gene Location: 3929299-3930030 bp Ori: APM66189.1 Feature: domain Description: Laminin_G_3 Location: 3929620-3929974 bp Feature: domain Description: Laminin_G_3 Location: 392 962 0-392 9974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Laminin_G_3 (pfam13385)