myRT

myRT report for GCA_001902435.1_ASM190243v1

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Seq: CP018448.1 Klebsiella pneumoniae strain Kp_Goe_33208 plasmid pKp_Goe_208-1, complete sequence (90685 bp)
Overview 1 RT 1: 1822-4627 bp 2 RT 2: 51460-56485 bp Neighborhood of RT #1 [1822, 4627] RVT-GII GIIM PHA02517 Neighborhood of RT #2 [51460, 56490] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 1822-2190 bp Feature: gene Location: 2105-2530 bp Feature: gene Location: 2499-4007 bp Ori: APM73577.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757-3489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757-3489 bp Feature: domain Description: GIIM Note: maturase Location: 3564-3762 bp Feature: domain Description: GIIM Note: maturase Location: 3564-3762 bp Feature: gene Location: 4088-4267 bp Feature: domain Description: PHA02517 Location: 4091-4268 bp Feature: domain Description: PHA0251 7 Location: 4091 -4268 bp Feature: gene Location: 4427-4627 bp Feature: gene Location: 51460-52731 bp Ori: APM73533.1 Feature: domain Description: umuC Location: 51463-52723 bp Feature: domain Description: umuC Location: 51 463-52723 bp Feature: gene Location: 52731-53162 bp Ori: APM73534.1 Feature: domain Description: PRK10276 Location: 52782-53145 bp Feature: domain Description: PRK1 0276 Location: 52782-531 45 bp Feature: gene Location: 53571-55055 bp Ori: APM73535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53973-54663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53973-54663 bp Feature: gene Location: 55048-55317 bp Feature: gene Location: 55525-56490 bp Ori: APM73537.1 Feature: domain Description: ArdC Location: 55651-56485 bp Feature: domain Description: ArdC Location: 55651 -56485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), ArdC (COG4227)

Seq: CP018447.1 Klebsiella pneumoniae strain Kp_Goe_33208 chromosome, complete genome (5497872 bp)
Overview 1 RT 1: 1194898-1199163 bp 2 RT 2: 1860440-1866569 bp Neighborhood of RT #1 [1194898, 1199168] D PRK09678 RVT-Retrons SmpB PRK10724 Neighborhood of RT #2 [1860440, 1866569] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 1194898-1195998 bp Ori: APM69205.1 Feature: domain Description: D Location: 1194913-1195984 bp Feature: domain Description: D Location: 1194913-1195984 bp Feature: gene Location: 1196089-1196307 bp Ori: APM69206.1 Feature: domain Description: PRK09678 Location: 1196092-1196290 bp Feature: domain Description: PRK09678 Location: 1196092 -11962 90 bp Feature: gene Location: 1196711-1197484 bp Ori: APM69207.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196771-1197308 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196771-1197308 bp Feature: gene Location: 1198099-1198581 bp Ori: APM69208.1 Feature: domain Description: SmpB Location: 1198129-1198573 bp Feature: domain Description: SmpB Location: 119812 9-1198573 bp Feature: gene Location: 1198692-1199168 bp Ori: APM69209.1 Feature: domain Description: PRK10724 Location: 1198698-1199163 bp Feature: domain Description: PRK1072 4 Location: 1198698-1199163 bp Feature: gene Location: 1860440-1861309 bp Ori: APM69796.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1860962-1861133 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1860962 -1861133 bp Feature: gene Location: 1861329-1861511 bp Feature: gene Location: 1861965-1863065 bp Ori: APM69797.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1862148-1862676 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1862 148-1862 676 bp Feature: gene Location: 1863180-1865426 bp Ori: APM69798.1 Feature: domain Description: AAA_15 Location: 1863183-1864191 bp Feature: domain Description: AAA_15 Location: 1863183-1864191 bp Feature: gene Location: 1866339-1866569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), Nuc_deoxyrib_tr (pfam05014), AAA_15 (pfam13175)