myRT

myRT report for GCA_001902515.1_ASM190251v1

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Seq: CP018450.1 Klebsiella pneumoniae strain Kp_Goe_71070 chromosome, complete genome (5497083 bp)
Overview 1 RT 1: 1194879-1199144 bp 2 RT 2: 1860427-1866556 bp Neighborhood of RT #1 [1194879, 1199149] D PRK09678 RVT-Retrons SmpB PRK10724 Neighborhood of RT #2 [1860427, 1866556] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 1194879-1195979 bp Ori: APM74829.1 Feature: domain Description: D Location: 1194894-1195965 bp Feature: domain Description: D Location: 1 1 94894-1 1 95965 bp Feature: gene Location: 1196070-1196288 bp Ori: APM74830.1 Feature: domain Description: PRK09678 Location: 1196073-1196271 bp Feature: domain Description: PRK09678 Location: 1 1 96073-1 1 96271 bp Feature: gene Location: 1196692-1197465 bp Ori: APM74831.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196752-1197289 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 96752-1 1 97289 bp Feature: gene Location: 1198080-1198562 bp Ori: APM74832.1 Feature: domain Description: SmpB Location: 1198110-1198554 bp Feature: domain Description: SmpB Location: 1 1 981 1 0-1 1 98554 bp Feature: gene Location: 1198673-1199149 bp Ori: APM74833.1 Feature: domain Description: PRK10724 Location: 1198679-1199144 bp Feature: domain Description: PRK1 0724 Location: 1 1 98679-1 1 991 44 bp Feature: gene Location: 1860427-1861296 bp Ori: APM75419.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1860949-1861120 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 860949-1 861 1 20 bp Feature: gene Location: 1861316-1861498 bp Feature: gene Location: 1861952-1863052 bp Ori: APM75420.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1862135-1862663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8621 35-1 862663 bp Feature: gene Location: 1863167-1865413 bp Ori: APM75421.1 Feature: domain Description: AAA_15 Location: 1863170-1864178 bp Feature: domain Description: AAA_1 5 Location: 1 8631 70-1 8641 78 bp Feature: gene Location: 1866326-1866556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), Nuc_deoxyrib_tr (pfam05014), AAA_15 (pfam13175)

Seq: CP018451.1 Klebsiella pneumoniae strain Kp_Goe_71070 plasmid pKp_Goe_070-1, complete sequence (90684 bp)
Overview 1 RT 1: 6349-11371 bp 2 RT 2: 58212-61017 bp Neighborhood of RT #1 [6349, 11379] ArdC RVT-GII PRK10276 umuC Neighborhood of RT #2 [58212, 61017] PHA02517 RVT-GII GIIM Feature: gene Location: 6349-7314 bp Ori: APM79111.1 Feature: domain Description: ArdC Location: 6475-7309 bp Feature: domain Description: ArdC Location: 6475-7309 bp Feature: gene Location: 7522-7791 bp Feature: gene Location: 7784-9268 bp Ori: APM79113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8186-8876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8186-8876 bp Feature: gene Location: 9677-10108 bp Ori: APM79114.1 Feature: domain Description: PRK10276 Location: 9728-10091 bp Feature: domain Description: PRK102 76 Location: 972 8-10091 bp Feature: gene Location: 10108-11379 bp Ori: APM79115.1 Feature: domain Description: umuC Location: 10111-11371 bp Feature: domain Description: umuC Location: 10111-11371 bp Feature: gene Location: 58212-58412 bp Feature: gene Location: 58572-58751 bp Feature: domain Description: PHA02517 Location: 58575-58752 bp Feature: domain Description: PHA02 517 Location: 58575-58752 bp Feature: gene Location: 58832-60340 bp Ori: APM79205.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59090-59822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59090-5982 2 bp Feature: domain Description: GIIM Note: maturase Location: 59897-60095 bp Feature: domain Description: GIIM Note: maturase Location: 59897-60095 bp Feature: gene Location: 60309-60734 bp Feature: gene Location: 60649-61017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)