myRT

myRT report for GCA_001902535.1_ASM190253v1

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Seq: CP018350.1 Klebsiella pneumoniae strain CAV1417 plasmid pCAV1417-67, complete sequence (66920 bp)
Overview 1 RT 1: 14167-18609 bp Neighborhood of RT #1 [14167, 18611] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 14167-15438 bp Ori: APM17961.1 Feature: domain Description: umuC Location: 14170-15430 bp Feature: domain Description: umuC Location: 1 41 70-1 5430 bp Feature: gene Location: 15438-15869 bp Ori: APM17962.1 Feature: domain Description: PRK10276 Location: 15489-15852 bp Feature: domain Description: PRK1 0276 Location: 1 5489-1 5852 bp Feature: gene Location: 16278-17762 bp Ori: APM17963.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16680-17370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6680-1 7370 bp Feature: gene Location: 17914-18189 bp Ori: APM17964.1 Feature: domain Description: InsA Location: 17920-18181 bp Feature: domain Description: InsA Location: 1 7920-1 81 81 bp Feature: gene Location: 18108-18611 bp Ori: APM17965.1 Feature: domain Description: DDE_Tnp_IS1 Location: 18219-18609 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 821 9-1 8609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: CP018351.1 Klebsiella pneumoniae strain CAV1417 plasmid pCAV1417-185, complete sequence (184940 bp)
Overview 1 RT 1: 154081-159075 bp Neighborhood of RT #1 [154081, 159077] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 154081-155352 bp Ori: APM18151.1 Feature: domain Description: umuC Location: 154084-155347 bp Feature: domain Description: umuC Location: 154084-155347 bp Feature: gene Location: 155352-155777 bp Ori: APM18152.1 Feature: domain Description: PRK10276 Location: 155355-155763 bp Feature: domain Description: PRK102 76 Location: 155355-155763 bp Feature: gene Location: 156183-157667 bp Ori: APM18153.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156585-157275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156585-1572 75 bp Feature: gene Location: 157901-158131 bp Feature: gene Location: 158652-159077 bp Ori: APM18155.1 Feature: domain Description: Antirestrict Location: 158787-159075 bp Feature: domain Description: Antirestrict Location: 158787-159075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP018352.1 Klebsiella pneumoniae strain CAV1417 chromosome, complete genome (5208900 bp)
Overview 1 RT 1: 1019342-1024622 bp 2 RT 2: 1056249-1061159 bp 3 RT 3: 1332773-1338137 bp 4 RT 4: 1729894-1735448 bp Neighborhood of RT #1 [1019342, 1024651] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #2 [1056249, 1061159] PRK10597 RVT-GII ParB Neighborhood of RT #3 [1332773, 1338193] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [1729894, 1735468] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 1019342-1020607 bp Ori: APM19186.1 Feature: domain Description: umuC Location: 1019345-1020602 bp Feature: domain Description: umuC Location: 10193 45-1020602 bp Feature: gene Location: 1020609-1021028 bp Ori: APM19187.1 Feature: domain Description: PRK10276 Location: 1020612-1021023 bp Feature: domain Description: PRK10276 Location: 1020612-1021023 bp Feature: gene Location: 1021107-1022591 bp Ori: APM19188.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1021509-1022199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1021509-1022199 bp Feature: gene Location: 1023600-1024022 bp Ori: APM19189.1 Feature: domain Description: XerC Location: 1023675-1023981 bp Feature: domain Description: XerC Location: 1023 675-1023 981 bp Feature: gene Location: 1024073-1024651 bp Ori: APM19190.1 Feature: domain Description: PinE Location: 1024082-1024622 bp Feature: domain Description: PinE Location: 1024082-1024622 bp Feature: gene Location: 1056249-1056470 bp Feature: gene Location: 1056549-1056782 bp Ori: APM19228.1 Feature: domain Description: PRK10597 Location: 1056552-1056777 bp Feature: domain Description: PRK10597 Location: 1056552-1056777 bp Feature: gene Location: 1056861-1058345 bp Ori: APM19229.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057263-1057953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057263 -1057953 bp Feature: gene Location: 1059024-1060136 bp Ori: APM19230.1 Feature: domain Description: ParB Location: 1059138-1059345 bp Feature: domain Description: ParB Location: 105913 8-10593 45 bp Feature: gene Location: 1060140-1061159 bp Feature: gene Location: 1332773-1334038 bp Ori: APM19524.1 Feature: domain Description: umuC Location: 1332776-1334036 bp Feature: domain Description: umuC Location: 13 3 2776-13 3 403 6 bp Feature: gene Location: 1334041-1334460 bp Ori: APM19525.1 Feature: domain Description: PRK10276 Location: 1334044-1334455 bp Feature: domain Description: PRK10276 Location: 13 3 4044-13 3 4455 bp Feature: gene Location: 1334539-1336023 bp Ori: APM19526.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1334941-1335631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 4941-13 3 563 1 bp Feature: gene Location: 1336641-1336883 bp Ori: APM19527.1 Feature: domain Description: DinI Location: 1336692-1336872 bp Feature: domain Description: DinI Location: 13 3 6692-13 3 6872 bp Feature: gene Location: 1337054-1338193 bp Ori: APM19528.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1337237-1338137 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 3 723 7-13 3 813 7 bp Feature: gene Location: 1729894-1730772 bp Ori: APM23323.1 Feature: domain Description: Phage_CI_repr Location: 1729921-1730104 bp Feature: domain Description: Phage_CI_repr Location: 1729921-173 0104 bp Feature: domain Description: Phage_CI_repr Location: 1730233-1730425 bp Feature: domain Description: Phage_CI_repr Location: 173 023 3 -173 0425 bp Feature: domain Description: Phage_CI_C Location: 1730452-1730746 bp Feature: domain Description: Phage_CI_C Location: 173 0452-173 0746 bp Feature: gene Location: 1730784-1731728 bp Feature: gene Location: 1731827-1733311 bp Ori: APM19919.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1732229-1732919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 2229-173 2919 bp Feature: gene Location: 1733730-1734782 bp Ori: APM19920.1 Feature: domain Description: int Location: 1733733-1734732 bp Feature: domain Description: int Location: 173 3 73 3 -173 473 2 bp Feature: gene Location: 1734905-1735468 bp Ori: APM19921.1 Feature: domain Description: YbjK Location: 1734911-1735448 bp Feature: domain Description: YbjK Location: 173 4911-173 5448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, XerC (COG4973), PinE (COG1961), PRK10597 (DNA damage-inducible protein I; Provisional), ParB (smart00470), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)