myRT

myRT report for GCA_001908275.1_ASM190827v1

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Seq: CP018621.1 Paenibacillus xylanexedens strain PAMC 22703 plasmid, complete sequence (44617 bp)
Overview 1 RT 1: 23132-27876 bp Neighborhood of RT #1 [23132, 27876] TpcC TpcC Slt70_like RVT-GII Intron_maturas2 HNHc SLT_2 NlpD Feature: gene Location: 23132-23725 bp Ori: APO48527.1 Feature: domain Description: TpcC Location: 23294-23414 bp Feature: domain Description: TpcC Location: 23294-2341 4 bp Feature: domain Description: TpcC Location: 23447-23690 bp Feature: domain Description: TpcC Location: 23447-23690 bp Feature: gene Location: 23722-24057 bp Ori: APO48528.1 Feature: domain Description: Slt70_like Location: 23902-24055 bp Feature: domain Description: Slt70_like Location: 23902-24055 bp Feature: gene Location: 24629-26455 bp Ori: APO48529.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24893-25724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24893-25724 bp Feature: domain Description: Intron_maturas2 Location: 25880-26135 bp Feature: domain Description: Intron_maturas2 Location: 25880-261 35 bp Feature: domain Description: HNHc Note: nucleases Location: 26255-26426 bp Feature: domain Description: HNHc Note: nucleases Location: 26255-26426 bp Feature: gene Location: 26646-27308 bp Ori: APO48530.1 Feature: domain Description: SLT_2 Location: 26661-26778 bp Feature: domain Description: SLT_2 Location: 26661 -26778 bp Feature: domain Description: NlpD Location: 26835-27297 bp Feature: domain Description: NlpD Location: 26835-27297 bp Feature: gene Location: 27313-27876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TpcC (pfam12642), Slt70_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SLT_2 (pfam13406), NlpD (COG0739)