myRT

myRT report for GCA_001908625.1_ASM190862v1

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Seq: CP018701.1 Klebsiella pneumoniae strain Kp_Goe_827024, complete genome (5374118 bp)
Overview 1 RT 1: 666452-669302 bp 2 RT 2: 3086690-3091573 bp Neighborhood of RT #1 [666452, 669302] DinI HTH_XRE RVT-Retrons Neighborhood of RT #2 [3086690, 3091575] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 666452-666682 bp Ori: APP55497.1 Feature: domain Description: DinI Location: 666497-666680 bp Feature: domain Description: DinI Location: 666497-666680 bp Feature: gene Location: 667303-667611 bp Ori: APP51069.1 Feature: domain Description: HTH_XRE Location: 667315-667480 bp Feature: domain Description: HTH_XRE Location: 66731 5-667480 bp Feature: gene Location: 667589-668539 bp Ori: APP51070.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667769-668312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667769-66831 2 bp Feature: gene Location: 668678-669109 bp Feature: gene Location: 669108-669302 bp Feature: gene Location: 3086690-3087655 bp Ori: APP53340.1 Feature: domain Description: PRK15110 Location: 3086693-3087653 bp Feature: domain Description: PRK1 51 1 0 Location: 3086693-3087653 bp Feature: gene Location: 3087860-3088528 bp Ori: APP53341.1 Feature: domain Description: PRK09951 Location: 3087863-3088526 bp Feature: domain Description: PRK09951 Location: 3087863-3088526 bp Feature: gene Location: 3088729-3089508 bp Ori: APP55595.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3088873-3089329 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 3088873-3089329 bp Feature: gene Location: 3089897-3090154 bp Feature: gene Location: 3090310-3091575 bp Ori: APP53343.1 Feature: domain Description: umuC Location: 3090313-3091573 bp Feature: domain Description: umuC Location: 309031 3-3091 573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons, PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: CP018705.1 Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-4, complete sequence (61010 bp)
Overview 1 RT 1: 21362-23704 bp Neighborhood of RT #1 [21362, 23704] InsA RVT-GII Feature: gene Location: 21362-21637 bp Ori: APP56170.1 Feature: domain Description: InsA Location: 21368-21629 bp Feature: domain Description: InsA Location: 2 1368-2 162 9 bp Feature: gene Location: 21671-21796 bp Feature: gene Location: 21789-23273 bp Ori: APP56172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22191-22881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 191-2 2 881 bp Feature: gene Location: 23273-23524 bp Feature: gene Location: 23589-23704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII