myRT

myRT report for GCA_001908675.1_ASM190867v1

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Seq: CP018713.1 Klebsiella pneumoniae strain Kp_Goe_152021, complete genome (5373055 bp)
Overview 1 RT 1: 666452-669302 bp 2 RT 2: 3085625-3090508 bp Neighborhood of RT #1 [666452, 669302] DinI HTH_XRE RVT-Retrons Neighborhood of RT #2 [3085625, 3090510] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 666452-666682 bp Ori: APP67234.1 Feature: domain Description: DinI Location: 666497-666680 bp Feature: domain Description: DinI Location: 666497-666680 bp Feature: gene Location: 667303-667611 bp Ori: APP62805.1 Feature: domain Description: HTH_XRE Location: 667315-667480 bp Feature: domain Description: HTH_XRE Location: 66731 5-667480 bp Feature: gene Location: 667589-668539 bp Ori: APP62806.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667769-668312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667769-66831 2 bp Feature: gene Location: 668678-669109 bp Feature: gene Location: 669108-669302 bp Feature: gene Location: 3085625-3086590 bp Ori: APP65076.1 Feature: domain Description: PRK15110 Location: 3085628-3086588 bp Feature: domain Description: PRK1 51 1 0 Location: 3085628-3086588 bp Feature: gene Location: 3086795-3087463 bp Ori: APP65077.1 Feature: domain Description: PRK09951 Location: 3086798-3087461 bp Feature: domain Description: PRK09951 Location: 3086798-3087461 bp Feature: gene Location: 3087664-3088443 bp Ori: APP67331.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3087808-3088264 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 3087808-3088264 bp Feature: gene Location: 3088832-3089089 bp Feature: gene Location: 3089245-3090510 bp Ori: APP65079.1 Feature: domain Description: umuC Location: 3089248-3090508 bp Feature: domain Description: umuC Location: 3089248-3090508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons, PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: CP018718.1 Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-4, complete sequence (61010 bp)
Overview 1 RT 1: 28917-31259 bp Neighborhood of RT #1 [28917, 31259] InsA RVT-GII Feature: gene Location: 28917-29192 bp Ori: APP67989.1 Feature: domain Description: InsA Location: 28923-29184 bp Feature: domain Description: InsA Location: 2 892 3-2 9184 bp Feature: gene Location: 29226-29351 bp Feature: gene Location: 29344-30828 bp Ori: APP67991.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29746-30436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9746-30436 bp Feature: gene Location: 30828-31079 bp Feature: gene Location: 31144-31259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII