myRT

myRT report for GCA_001922465.1_ASM192246v1

Download annotations/find similar RTs

Seq: CP018819.1 Klebsiella pneumoniae strain AR_0049 plasmid unitig_3, complete sequence (85161 bp)
Overview 1 RT 1: 82911-86114 bp Neighborhood of RT #1 [82911, 86506] umuC PRK10276 RVT-GII Feature: gene Location: 82911-84182 bp Ori: APR51017.1 Feature: domain Description: umuC Location: 82914-84174 bp Feature: domain Description: umuC Location: 8291 4-841 74 bp Feature: gene Location: 84182-84613 bp Ori: APR51018.1 Feature: domain Description: PRK10276 Location: 84233-84596 bp Feature: domain Description: PRK1 0276 Location: 84233-84596 bp Feature: gene Location: 85022-86506 bp Ori: APR50927.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85424-86114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85424-861 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP018816.1 Klebsiella pneumoniae strain AR_0049, complete genome (5435743 bp)
Overview 1 RT 1: 2158096-2161590 bp 2 RT 2: 3768428-3772079 bp 3 RT 3: 3848582-3853731 bp 4 RT 4: 3994606-3999970 bp 5 RT 5: 4365841-4371395 bp 6 RT 6: 4810560-4814012 bp Neighborhood of RT #1 [2158096, 2161667] RVT-GII PRK10276 Terminase_2 Neighborhood of RT #2 [3768428, 3772135] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [3848582, 3853739] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #4 [3994606, 4000026] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #5 [4365841, 4371415] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #6 [4810560, 4814068] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 2158096-2158335 bp Feature: gene Location: 2158335-2158673 bp Feature: gene Location: 2159097-2160581 bp Ori: APR47282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2159499-2160189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 159499-2 160189 bp Feature: gene Location: 2160660-2160989 bp Ori: APR47283.1 Feature: domain Description: PRK10276 Location: 2160666-2160819 bp Feature: domain Description: PRK102 76 Location: 2 160666-2 160819 bp Feature: gene Location: 2161047-2161667 bp Ori: APR47284.1 Feature: domain Description: Terminase_2 Location: 2161092-2161590 bp Feature: domain Description: Terminase_2 Location: 2 161092 -2 161590 bp Feature: gene Location: 3768428-3768676 bp Ori: APR48785.1 Feature: domain Description: PRK10597 Location: 3768431-3768671 bp Feature: domain Description: PRK10597 Location: 3768431-3768671 bp Feature: gene Location: 3768899-3769183 bp Feature: gene Location: 3769261-3770745 bp Ori: APR48787.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3769663-3770353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3769663-3770353 bp Feature: gene Location: 3771198-3771407 bp Feature: gene Location: 3771404-3772135 bp Ori: APR48789.1 Feature: domain Description: Laminin_G_3 Location: 3771740-3772079 bp Feature: domain Description: Laminin_G_3 Location: 3771740-3772 079 bp Feature: gene Location: 3848582-3849847 bp Ori: APR48884.1 Feature: domain Description: umuC Location: 3848585-3849845 bp Feature: domain Description: umuC Location: 3848585-3849845 bp Feature: gene Location: 3849849-3850268 bp Ori: APR50559.1 Feature: domain Description: PRK10276 Location: 3849852-3850263 bp Feature: domain Description: PRK102 76 Location: 3849852 -38502 63 bp Feature: gene Location: 3850348-3851832 bp Ori: APR48885.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3850750-3851440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3850750-3851440 bp Feature: gene Location: 3852730-3853152 bp Ori: APR48886.1 Feature: domain Description: XerC Location: 3852766-3853111 bp Feature: domain Description: XerC Location: 3852 766-3853111 bp Feature: gene Location: 3853230-3853739 bp Ori: APR48887.1 Feature: domain Description: PinE Location: 3853278-3853731 bp Feature: domain Description: PinE Location: 38532 78-3853731 bp Feature: gene Location: 3994606-3995871 bp Ori: APR49036.1 Feature: domain Description: umuC Location: 3994609-3995869 bp Feature: domain Description: umuC Location: 3994609-3995869 bp Feature: gene Location: 3995874-3996293 bp Ori: APR49037.1 Feature: domain Description: PRK10276 Location: 3995877-3996288 bp Feature: domain Description: PRK102 76 Location: 3995877-39962 88 bp Feature: gene Location: 3996372-3997856 bp Ori: APR49038.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3996774-3997464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3996774-3997464 bp Feature: gene Location: 3998474-3998716 bp Ori: APR49039.1 Feature: domain Description: DinI Location: 3998525-3998705 bp Feature: domain Description: DinI Location: 399852 5-3998705 bp Feature: gene Location: 3998887-4000026 bp Ori: APR49040.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3999070-3999970 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3999070-3999970 bp Feature: gene Location: 4365841-4366719 bp Ori: APR49397.1 Feature: domain Description: Phage_CI_repr Location: 4365868-4366051 bp Feature: domain Description: Phage_CI_repr Location: 4365868-4366051 bp Feature: domain Description: Phage_CI_repr Location: 4366180-4366372 bp Feature: domain Description: Phage_CI_repr Location: 4366180-4366372 bp Feature: domain Description: Phage_CI_C Location: 4366399-4366693 bp Feature: domain Description: Phage_CI_C Location: 4366399-4366693 bp Feature: gene Location: 4366731-4367675 bp Feature: gene Location: 4367774-4369258 bp Ori: APR49399.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4368176-4368866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4368176-4368866 bp Feature: gene Location: 4369677-4370729 bp Ori: APR49400.1 Feature: domain Description: int Location: 4369680-4370679 bp Feature: domain Description: int Location: 4369680-4370679 bp Feature: gene Location: 4370852-4371415 bp Ori: APR49401.1 Feature: domain Description: YbjK Location: 4370858-4371395 bp Feature: domain Description: YbjK Location: 4370858-4371395 bp Feature: gene Location: 4810560-4810877 bp Ori: APR49807.1 Feature: domain Description: PRK10276 Location: 4810566-4810680 bp Feature: domain Description: PRK102 76 Location: 4810566-4810680 bp Feature: domain Description: PRK10276 Location: 4810707-4810776 bp Feature: domain Description: PRK102 76 Location: 4810707-4810776 bp Feature: gene Location: 4810877-4811116 bp Feature: gene Location: 4811194-4812678 bp Ori: APR49809.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4811596-4812286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4811596-4812 2 86 bp Feature: gene Location: 4813131-4813340 bp Feature: gene Location: 4813337-4814068 bp Ori: APR49811.1 Feature: domain Description: Laminin_G_3 Location: 4813658-4814012 bp Feature: domain Description: Laminin_G_3 Location: 4813658-4814012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Terminase_2 (pfam03592), PRK10597 (DNA damage-inducible protein I; Provisional), Laminin_G_3 (pfam13385), umuC (PRK03609), XerC (COG4973), PinE (COG1961), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)

Seq: CP018818.1 Klebsiella pneumoniae strain AR_0049 plasmid unitig_2, complete sequence (117755 bp)
Overview 1 RT 1: 96543-101534 bp Neighborhood of RT #1 [96543, 101539] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 96543-96968 bp Ori: APR50898.1 Feature: domain Description: Antirestrict Location: 96678-96966 bp Feature: domain Description: Antirestrict Location: 96678-96966 bp Feature: gene Location: 97489-97719 bp Feature: gene Location: 97953-99437 bp Ori: APR50900.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98355-99045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 983 55-99045 bp Feature: gene Location: 99843-100268 bp Ori: APR50901.1 Feature: domain Description: PRK10276 Location: 99846-100254 bp Feature: domain Description: PRK10276 Location: 99846-100254 bp Feature: gene Location: 100268-101539 bp Ori: APR50902.1 Feature: domain Description: umuC Location: 100271-101534 bp Feature: domain Description: umuC Location: 100271-10153 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)