myRT

myRT report for GCA_001931755.2_ASM193175v2

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Seq: CP015510.2 Wolbachia endosymbiont of Folsomia candida strain Berlin, complete genome (1801626 bp)
Overview 1 RT 1: 423172-442136 bp 2 RT 2: 1081657-1086196 bp 3 RT 3: 1223669-1228432 bp Neighborhood of RT #1 [423172, 442136] DUF5372 PinE Zn_ribbon_recom RVT-GII GIIM ANK ANK ANK ANK ANK Latrotoxin_C Neighborhood of RT #2 [1081657, 1086228] DDE_Tnp_1 Dimer_Tnp_Tn5 RVT-GII PinE Zn_ribbon_recom DUF5372 Neighborhood of RT #3 [1223669, 1228575] group_II_RT_mat PinE Zn_ribbon_recom RVT-GII AAA_25 Feature: gene Location: 423172-423504 bp Ori: APR97795.1 Feature: domain Description: DUF5372 Location: 423244-423472 bp Feature: domain Description: DUF5372 Location: 423244-423472 bp Feature: gene Location: 423666-425759 bp Ori: APR97794.1 Feature: domain Description: PinE Location: 423711-424374 bp Feature: domain Description: PinE Location: 42371 1 -424374 bp Feature: domain Description: Zn_ribbon_recom Location: 424665-424842 bp Feature: domain Description: Zn_ribbon_recom Location: 424665-424842 bp Feature: gene Location: 425767-426789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425770-426373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425770-426373 bp Feature: domain Description: GIIM Note: maturase Location: 426445-426664 bp Feature: domain Description: GIIM Note: maturase Location: 426445-426664 bp Feature: gene Location: 427140-441317 bp Ori: APR97793.1 Feature: domain Description: ANK Location: 433551-433923 bp Feature: domain Description: ANK Location: 433551 -433923 bp Feature: domain Description: ANK Location: 434259-434610 bp Feature: domain Description: ANK Location: 434259-43461 0 bp Feature: domain Description: ANK Location: 434709-434928 bp Feature: domain Description: ANK Location: 434709-434928 bp Feature: domain Description: ANK Location: 439788-440097 bp Feature: domain Description: ANK Location: 439788-440097 bp Feature: domain Description: ANK Location: 440124-440496 bp Feature: domain Description: ANK Location: 4401 24-440496 bp Feature: domain Description: Latrotoxin_C Location: 440772-441069 bp Feature: domain Description: Latrotoxin_C Location: 440772-441 069 bp Feature: gene Location: 441879-442136 bp Feature: gene Location: 1081657-1081863 bp Feature: gene Location: 1081852-1082934 bp Feature: domain Description: DDE_Tnp_1 Location: 1082074-1082629 bp Feature: domain Description: DDE_Tnp_1 Location: 1 082074-1 082629 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1082635-1082914 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1 082635-1 08291 4 bp Feature: gene Location: 1082941-1083633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1082944-1083595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 082944-1 083595 bp Feature: gene Location: 1083641-1085734 bp Ori: APR98687.1 Feature: domain Description: PinE Location: 1083686-1084349 bp Feature: domain Description: PinE Location: 1 083686-1 084349 bp Feature: domain Description: Zn_ribbon_recom Location: 1084640-1084817 bp Feature: domain Description: Zn_ribbon_recom Location: 1 084640-1 08481 7 bp Feature: gene Location: 1085896-1086228 bp Ori: APR98686.1 Feature: domain Description: DUF5372 Location: 1085968-1086196 bp Feature: domain Description: DUF5372 Location: 1 085968-1 0861 96 bp Feature: gene Location: 1223669-1223965 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1223759-1223966 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 223759-1 223966 bp Feature: gene Location: 1224443-1226536 bp Ori: APR98575.1 Feature: domain Description: PinE Location: 1224488-1225151 bp Feature: domain Description: PinE Location: 1 224488-1 2251 51 bp Feature: domain Description: Zn_ribbon_recom Location: 1225442-1225619 bp Feature: domain Description: Zn_ribbon_recom Location: 1 225442-1 22561 9 bp Feature: gene Location: 1226517-1227566 bp Ori: APR98574.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1226547-1227198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 226547-1 2271 98 bp Feature: gene Location: 1227725-1227862 bp Feature: gene Location: 1227877-1228575 bp Ori: APR98572.1 Feature: domain Description: AAA_25 Location: 1227883-1228432 bp Feature: domain Description: AAA_25 Location: 1 227883-1 228432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), PinE (COG1961), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), ANK (smart00248), Latrotoxin_C (pfam15658), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), group_II_RT_mat (TIGR04416)
AAA_25 (pfam13481)