myRT

myRT report for GCA_001936215.1_ASM193621v1

Download annotations/find similar RTs

Seq: CP018363.1 Mycobacterium avium subsp. hominissuis strain H87 chromosome, complete genome (5626623 bp)
Overview 1 RT 1: 850483-858562 bp 2 RT 2: 958492-963143 bp 3 RT 3: 997508-1003351 bp 4 RT 4: 1020303-1025463 bp Neighborhood of RT #1 [850483, 858660] Metal_hydrol DEDD_Tnp_IS110 Transposase_20 RVT_N RVT-GII GIIM Transposase_mut Transposase_mut Neighborhood of RT #2 [958492, 963154] PRK06526 HTH_38 Tra8 RVT-GII GIIM Tra8 HTH_17 Neighborhood of RT #3 [997508, 1003371] CypX TetR_N TetR_C_35 RVT-GII GIIM MhpC Neighborhood of RT #4 [1020303, 1025465] HTH_38 Tra8 Transposase_mut RVT-GII GIIM Tra8 PRK07799 Feature: gene Location: 850483-851319 bp Ori: APT13473.1 Feature: domain Description: Metal_hydrol Location: 850507-851245 bp Feature: domain Description: Metal_hydrol Location: 850507-851 245 bp Feature: gene Location: 852167-853405 bp Ori: APT09601.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 852179-852650 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 8521 79-852650 bp Feature: domain Description: Transposase_20 Location: 852992-853244 bp Feature: domain Description: Transposase_20 Location: 852992-853244 bp Feature: gene Location: 854118-855341 bp Feature: domain Description: RVT_N Location: 854148-854385 bp Feature: domain Description: RVT_N Location: 8541 48-854385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854445-855105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854445-8551 05 bp Feature: domain Description: GIIM Note: maturase Location: 855174-855336 bp Feature: domain Description: GIIM Note: maturase Location: 8551 74-855336 bp Feature: gene Location: 855409-856641 bp Ori: APT09602.1 Feature: domain Description: Transposase_mut Location: 855427-856543 bp Feature: domain Description: Transposase_mut Location: 855427-856543 bp Feature: gene Location: 857428-858660 bp Ori: APT09603.1 Feature: domain Description: Transposase_mut Location: 857446-858562 bp Feature: domain Description: Transposase_mut Location: 857446-858562 bp Feature: gene Location: 958492-959304 bp Ori: APT09670.1 Feature: domain Description: PRK06526 Location: 958540-959284 bp Feature: domain Description: PRK06526 Location: 958540-959284 bp Feature: gene Location: 959420-960220 bp Feature: domain Description: HTH_38 Location: 959483-959558 bp Feature: domain Description: HTH_38 Location: 959483-959558 bp Feature: domain Description: Tra8 Location: 959657-960221 bp Feature: domain Description: Tra8 Location: 959657-960221 bp Feature: gene Location: 960776-962287 bp Ori: APT09671.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961157-961841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961 1 57-961 841 bp Feature: domain Description: GIIM Note: maturase Location: 961916-962132 bp Feature: domain Description: GIIM Note: maturase Location: 961 91 6-9621 32 bp Feature: gene Location: 962403-962861 bp Feature: domain Description: Tra8 Location: 962415-962832 bp Feature: domain Description: Tra8 Location: 96241 5-962832 bp Feature: gene Location: 962948-963154 bp Ori: APT13483.1 Feature: domain Description: HTH_17 Location: 962975-963143 bp Feature: domain Description: HTH_1 7 Location: 962975-9631 43 bp Feature: gene Location: 997508-998809 bp Ori: APT09692.1 Feature: domain Description: CypX Location: 997583-998798 bp Feature: domain Description: CypX Location: 997583-998798 bp Feature: gene Location: 998897-999487 bp Ori: APT09693.1 Feature: domain Description: TetR_N Location: 998915-999047 bp Feature: domain Description: TetR_N Location: 99891 5-999047 bp Feature: domain Description: TetR_C_35 Location: 999116-999449 bp Feature: domain Description: TetR_C_35 Location: 9991 1 6-999449 bp Feature: gene Location: 1000234-1001682 bp Ori: APT09694.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000552-1001239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 000552-1 001 239 bp Feature: domain Description: GIIM Note: maturase Location: 1001314-1001509 bp Feature: domain Description: GIIM Note: maturase Location: 1 001 31 4-1 001 509 bp Feature: gene Location: 1002287-1002478 bp Feature: gene Location: 1002475-1003371 bp Ori: APT09695.1 Feature: domain Description: MhpC Location: 1002499-1003351 bp Feature: domain Description: MhpC Location: 1 002499-1 003351 bp Feature: gene Location: 1020303-1021103 bp Feature: domain Description: HTH_38 Location: 1020366-1020441 bp Feature: domain Description: HTH_38 Location: 1 020366-1 020441 bp Feature: domain Description: Tra8 Location: 1020540-1021104 bp Feature: domain Description: Tra8 Location: 1 020540-1 021 1 04 bp Feature: gene Location: 1021602-1022849 bp Ori: APT09708.1 Feature: domain Description: Transposase_mut Location: 1021656-1022742 bp Feature: domain Description: Transposase_mut Location: 1 021 656-1 022742 bp Feature: gene Location: 1023084-1024595 bp Ori: APT09709.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023465-1024149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 023465-1 0241 49 bp Feature: domain Description: GIIM Note: maturase Location: 1024224-1024440 bp Feature: domain Description: GIIM Note: maturase Location: 1 024224-1 024440 bp Feature: gene Location: 1024711-1025169 bp Feature: domain Description: Tra8 Location: 1024723-1025140 bp Feature: domain Description: Tra8 Location: 1 024723-1 0251 40 bp Feature: gene Location: 1025286-1025465 bp Feature: domain Description: PRK07799 Location: 1025301-1025463 bp Feature: domain Description: PRK07799 Location: 1 025301 -1 025463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Metal_hydrol (pfam10118), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), PRK06526 (transposase; Provisional), HTH_38 (pfam13936), Tra8 (COG2826)
HTH_17 (pfam12728), CypX (COG2124), TetR_N (pfam00440), TetR_C_35 (pfam18556), MhpC (COG0596), PRK07799 (crotonase/enoyl-CoA hydratase family protein)