myRT

myRT report for GCA_001941825.1_ASM194182v1

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Seq: CP019038.1 Massilia putida strain 6NM-7T chromosome, complete genome (6987670 bp)
Overview 1 RT 1: 2741560-2747320 bp 2 RT 2: 6316665-6320367 bp Neighborhood of RT #1 [2741560, 2747331] ispH SlpA RVT_N RVT-GII GIIM HNHc PRK07041 PBP2_Nitroaromatics_like Neighborhood of RT #2 [6316665, 6320384] DUF551 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 2741560-2742510 bp Feature: domain Description: ispH Location: 2741572-2742457 bp Feature: domain Description: ispH Location: 2741 572-2742457 bp Feature: gene Location: 2742531-2742986 bp Feature: domain Description: SlpA Location: 2742561-2742981 bp Feature: domain Description: SlpA Location: 2742561 -2742981 bp Feature: gene Location: 2743101-2744753 bp Feature: domain Description: RVT_N Location: 2743110-2743353 bp Feature: domain Description: RVT_N Location: 27431 1 0-2743353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2743398-2744046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2743398-2744046 bp Feature: domain Description: GIIM Note: maturase Location: 2744100-2744331 bp Feature: domain Description: GIIM Note: maturase Location: 27441 00-2744331 bp Feature: domain Description: HNHc Note: nucleases Location: 2744565-2744715 bp Feature: domain Description: HNHc Note: nucleases Location: 2744565-274471 5 bp Feature: gene Location: 2745988-2746782 bp Feature: domain Description: PRK07041 Location: 2746096-2746774 bp Feature: domain Description: PRK07041 Location: 2746096-2746774 bp Feature: gene Location: 2746795-2747331 bp Feature: domain Description: PBP2_Nitroaromatics_like Location: 2747131-2747320 bp Feature: domain Description: PBP2_Nitroaromatics_like Location: 27471 31 -2747320 bp Feature: gene Location: 6316665-6316970 bp Feature: gene Location: 6317152-6318132 bp Feature: domain Description: DUF551 Location: 6317827-6318100 bp Feature: domain Description: DUF551 Location: 631 7827-631 81 00 bp Feature: gene Location: 6318159-6319541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6318627-6319392 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 631 8627-631 9392 bp Feature: gene Location: 6319553-6319906 bp Feature: domain Description: Avd_like Location: 6319580-6319886 bp Feature: domain Description: Avd_like Location: 631 9580-631 9886 bp Feature: gene Location: 6319926-6320384 bp Feature: domain Description: DUF1566 Location: 6320142-6320367 bp Feature: domain Description: DUF1 566 Location: 63201 42-6320367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ispH (PRK01045), SlpA (COG1047), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK07041 (SDR family oxidoreductase), PBP2_Nitroaromatics_like (cd08417), DUF551 (pfam04448), RVT-DGRs
Avd_like (cd16376), DUF1566 (pfam07603)