myRT

myRT report for GCA_001952895.1_ASM195289v1

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Seq: CP015386.1 Klebsiella pneumoniae strain NY9 plasmid pNY9_1, complete sequence (199497 bp)
Overview 1 RT 1: 188661-193652 bp Neighborhood of RT #1 [188661, 193657] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 188661-189086 bp Ori: APV28107.1 Feature: domain Description: Antirestrict Location: 188796-189084 bp Feature: domain Description: Antirestrict Location: 1 88796-1 89084 bp Feature: gene Location: 189607-189837 bp Feature: gene Location: 190071-191555 bp Ori: APV28109.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190473-191163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90473-1 91 1 63 bp Feature: gene Location: 191961-192386 bp Ori: APV28110.1 Feature: domain Description: PRK10276 Location: 191964-192372 bp Feature: domain Description: PRK1 0276 Location: 1 91 964-1 92372 bp Feature: gene Location: 192386-193657 bp Ori: APV28111.1 Feature: domain Description: umuC Location: 192389-193652 bp Feature: domain Description: umuC Location: 1 92389-1 93652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP015389.1 Klebsiella pneumoniae strain NY9 plasmid pNY9_4, complete sequence (53300 bp)
Overview 1 RT 1: 4083-13244 bp Neighborhood of RT #1 [4083, 13258] UvrA UvrA PHA02517 RVT-GII GIIM COG3547 fghA_ester_D Feature: gene Location: 4083-6734 bp Ori: APV28365.1 Feature: domain Description: UvrA Location: 4131-4479 bp Feature: domain Description: UvrA Location: 4131-4479 bp Feature: domain Description: UvrA Location: 4509-6720 bp Feature: domain Description: UvrA Location: 4509-672 0 bp Feature: gene Location: 7677-8102 bp Ori: APV28366.1 Feature: domain Description: PHA02517 Location: 7698-8037 bp Feature: domain Description: PHA02 517 Location: 7698-8037 bp Feature: gene Location: 8708-10216 bp Ori: APV28416.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8966-9698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8966-9698 bp Feature: domain Description: GIIM Note: maturase Location: 9773-9971 bp Feature: domain Description: GIIM Note: maturase Location: 9773-9971 bp Feature: gene Location: 10758-11834 bp Ori: APV28367.1 Feature: domain Description: COG3547 Location: 10797-11718 bp Feature: domain Description: COG3547 Location: 10797-11718 bp Feature: gene Location: 12422-13258 bp Ori: APV28368.1 Feature: domain Description: fghA_ester_D Location: 12428-13244 bp Feature: domain Description: fghA_ester_D Location: 12 42 8-132 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), fghA_ester_D (TIGR02821)

Seq: CP015385.1 Klebsiella pneumoniae strain NY9, complete genome (5348589 bp)
Overview 1 RT 1: 2939727-2946625 bp 2 RT 2: 3238935-3244299 bp 3 RT 3: 3581443-3586997 bp Neighborhood of RT #1 [2939727, 2946798] umuC PRK10276 RVT-GII ParB Dam Neighborhood of RT #2 [3238935, 3244355] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3581443, 3587017] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 2939727-2940992 bp Ori: APV25472.1 Feature: domain Description: umuC Location: 2939730-2940987 bp Feature: domain Description: umuC Location: 293 973 0-2940987 bp Feature: gene Location: 2940994-2941413 bp Ori: APV25473.1 Feature: domain Description: PRK10276 Location: 2940997-2941408 bp Feature: domain Description: PRK10276 Location: 2940997-2941408 bp Feature: gene Location: 2941492-2942976 bp Ori: APV25474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941894-2942584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2941894-2942584 bp Feature: gene Location: 2943654-2944766 bp Ori: APV25475.1 Feature: domain Description: ParB Location: 2943768-2943975 bp Feature: domain Description: ParB Location: 2943 768-2943 975 bp Feature: gene Location: 2945791-2946798 bp Ori: APV25476.1 Feature: domain Description: Dam Location: 2945884-2946625 bp Feature: domain Description: Dam Location: 2945884-2946625 bp Feature: gene Location: 3238935-3240200 bp Ori: APV25779.1 Feature: domain Description: umuC Location: 3238938-3240198 bp Feature: domain Description: umuC Location: 3 23 893 8-3 240198 bp Feature: gene Location: 3240203-3240622 bp Ori: APV25780.1 Feature: domain Description: PRK10276 Location: 3240206-3240617 bp Feature: domain Description: PRK10276 Location: 3 240206-3 240617 bp Feature: gene Location: 3240701-3242185 bp Ori: APV25781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3241103-3241793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 241103 -3 241793 bp Feature: gene Location: 3242803-3243045 bp Ori: APV25782.1 Feature: domain Description: DinI Location: 3242854-3243034 bp Feature: domain Description: DinI Location: 3 242854-3 243 03 4 bp Feature: gene Location: 3243216-3244355 bp Ori: APV25783.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3243399-3244299 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3 243 3 99-3 244299 bp Feature: gene Location: 3581443-3582321 bp Ori: APV26103.1 Feature: domain Description: Phage_CI_repr Location: 3581470-3581653 bp Feature: domain Description: Phage_CI_repr Location: 3 581470-3 581653 bp Feature: domain Description: Phage_CI_repr Location: 3581782-3581974 bp Feature: domain Description: Phage_CI_repr Location: 3 581782-3 581974 bp Feature: domain Description: Phage_CI_C Location: 3582001-3582295 bp Feature: domain Description: Phage_CI_C Location: 3 582001-3 582295 bp Feature: gene Location: 3582333-3583277 bp Feature: gene Location: 3583376-3584860 bp Ori: APV26105.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583778-3584468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 583 778-3 584468 bp Feature: gene Location: 3585279-3586331 bp Ori: APV26106.1 Feature: domain Description: int Location: 3585282-3586281 bp Feature: domain Description: int Location: 3 585282-3 586281 bp Feature: gene Location: 3586454-3587017 bp Ori: APV26107.1 Feature: domain Description: YbjK Location: 3586460-3586997 bp Feature: domain Description: YbjK Location: 3 586460-3 586997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ParB (smart00470), Dam (pfam05869), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)
YbjK (COG3226)