myRT

myRT report for GCA_001952915.1_ASM195291v1

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Seq: CP015392.1 Klebsiella pneumoniae strain CR14, complete genome (5470889 bp)
Overview 1 RT 1: 1410252-1413659 bp 2 RT 2: 1862093-1868564 bp 3 RT 3: 3313262-3318626 bp 4 RT 4: 3655615-3661169 bp Neighborhood of RT #1 [1410252, 1413733] RVT-GII Terminase_2 Neighborhood of RT #2 [1862093, 1868578] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [3313262, 3318682] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [3655615, 3661189] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 1410252-1410491 bp Feature: gene Location: 1410491-1410829 bp Feature: gene Location: 1410926-1412410 bp Ori: APV29834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1411328-1412018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 1 328-1 41 201 8 bp Feature: gene Location: 1412814-1413071 bp Feature: gene Location: 1413149-1413733 bp Ori: APV29835.1 Feature: domain Description: Terminase_2 Location: 1413194-1413659 bp Feature: domain Description: Terminase_2 Location: 1 41 31 94-1 41 3659 bp Feature: gene Location: 1862093-1863517 bp Ori: APV30212.1 Gene: sbcB Feature: domain Description: SbcB Location: 1862099-1863515 bp Feature: domain Description: SbcB Location: 1 862099-1 86351 5 bp Feature: gene Location: 1863698-1864861 bp Ori: APV33577.1 Feature: domain Description: dacD Location: 1863701-1864856 bp Feature: domain Description: dacD Location: 1 863701 -1 864856 bp Feature: gene Location: 1865382-1866866 bp Ori: APV30213.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1865784-1866474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 865784-1 866474 bp Feature: gene Location: 1866948-1867421 bp Ori: APV30214.1 Feature: domain Description: PRK10016 Location: 1866951-1867410 bp Feature: domain Description: PRK1 001 6 Location: 1 866951 -1 86741 0 bp Feature: gene Location: 1867520-1868578 bp Ori: APV30215.1 Feature: domain Description: YccC Location: 1867526-1868564 bp Feature: domain Description: YccC Location: 1 867526-1 868564 bp Feature: gene Location: 3313262-3314527 bp Ori: APV31527.1 Feature: domain Description: umuC Location: 3313265-3314525 bp Feature: domain Description: umuC Location: 331 3265-331 4525 bp Feature: gene Location: 3314530-3314949 bp Ori: APV31528.1 Feature: domain Description: PRK10276 Location: 3314533-3314944 bp Feature: domain Description: PRK1 0276 Location: 331 4533-331 4944 bp Feature: gene Location: 3315028-3316512 bp Ori: APV31529.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3315430-3316120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 5430-331 61 20 bp Feature: gene Location: 3317130-3317372 bp Ori: APV31530.1 Feature: domain Description: DinI Location: 3317181-3317361 bp Feature: domain Description: DinI Location: 331 71 81 -331 7361 bp Feature: gene Location: 3317543-3318682 bp Ori: APV31531.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3317726-3318626 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 331 7726-331 8626 bp Feature: gene Location: 3655615-3656493 bp Ori: APV33653.1 Feature: domain Description: Phage_CI_repr Location: 3655642-3655825 bp Feature: domain Description: Phage_CI_repr Location: 3655642-3655825 bp Feature: domain Description: Phage_CI_repr Location: 3655954-3656146 bp Feature: domain Description: Phage_CI_repr Location: 3655954-36561 46 bp Feature: domain Description: Phage_CI_C Location: 3656173-3656467 bp Feature: domain Description: Phage_CI_C Location: 36561 73-3656467 bp Feature: gene Location: 3656505-3657449 bp Feature: gene Location: 3657548-3659032 bp Ori: APV31851.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3657950-3658640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3657950-3658640 bp Feature: gene Location: 3659451-3660503 bp Ori: APV31852.1 Feature: domain Description: int Location: 3659454-3660453 bp Feature: domain Description: int Location: 3659454-3660453 bp Feature: gene Location: 3660626-3661189 bp Ori: APV31853.1 Feature: domain Description: YbjK Location: 3660632-3661169 bp Feature: domain Description: YbjK Location: 3660632-3661 1 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Terminase_2 (pfam03592), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)

Seq: CP015393.1 Klebsiella pneumoniae strain CR14 plasmid pCR14_1, complete sequence (202696 bp)
Overview 1 RT 1: 158440-163431 bp Neighborhood of RT #1 [158440, 163436] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 158440-158865 bp Ori: APV33884.1 Feature: domain Description: Antirestrict Location: 158575-158863 bp Feature: domain Description: Antirestrict Location: 158575-158863 bp Feature: gene Location: 159386-159616 bp Feature: gene Location: 159850-161334 bp Ori: APV33886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160252-160942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602 52 -160942 bp Feature: gene Location: 161740-162165 bp Ori: APV33887.1 Feature: domain Description: PRK10276 Location: 161743-162151 bp Feature: domain Description: PRK102 76 Location: 161743-162 151 bp Feature: gene Location: 162165-163436 bp Ori: APV33888.1 Feature: domain Description: umuC Location: 162168-163431 bp Feature: domain Description: umuC Location: 162 168-163431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)