myRT

myRT report for GCA_001969405.1_ASM196940v1

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Seq: CP014760.1 Legionella pneumophila strain F4469 chromosome, complete genome (3439440 bp)
Overview 1 RT 1: 2312436-2319188 bp 2 RT 2: 2946731-2951840 bp Neighborhood of RT #1 [2312436, 2319188] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Neighborhood of RT #2 [2946731, 2952193] PAS_4 LuxR_C_like PHA02517 RVT-GII GIIM InsE AbiJ_NTD4 Feature: gene Location: 2312436-2312813 bp Ori: APX20236.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2312463-2312799 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 231 2463-231 2799 bp Feature: gene Location: 2313119-2314570 bp Ori: APX20237.1 Feature: domain Description: Tnp_DNA_bind Location: 2313158-2313326 bp Feature: domain Description: Tnp_DNA_bind Location: 231 31 58-231 3326 bp Feature: domain Description: DDE_Tnp_1 Location: 2313983-2314277 bp Feature: domain Description: DDE_Tnp_1 Location: 231 3983-231 4277 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2314283-2314562 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 231 4283-231 4562 bp Feature: gene Location: 2314641-2316161 bp Ori: APX20238.1 Feature: domain Description: RVT_N Location: 2314698-2314941 bp Feature: domain Description: RVT_N Location: 231 4698-231 4941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314986-2315610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 4986-231 561 0 bp Feature: domain Description: GIIM Note: maturase Location: 2315661-2315895 bp Feature: domain Description: GIIM Note: maturase Location: 231 5661 -231 5895 bp Feature: gene Location: 2317009-2317383 bp Ori: APX20239.1 Feature: domain Description: Tra_M Location: 2317057-2317252 bp Feature: domain Description: Tra_M Location: 231 7057-231 7252 bp Feature: gene Location: 2317581-2319188 bp Feature: gene Location: 2946731-2947414 bp Ori: APX20741.1 Feature: domain Description: PAS_4 Location: 2946788-2947073 bp Feature: domain Description: PAS_4 Location: 2946788-2947073 bp Feature: domain Description: LuxR_C_like Location: 2947193-2947349 bp Feature: domain Description: LuxR_C_like Location: 29471 93-2947349 bp Feature: gene Location: 2947807-2948634 bp Ori: APX20742.1 Feature: domain Description: PHA02517 Location: 2947822-2948608 bp Feature: domain Description: PHA0251 7 Location: 2947822-2948608 bp Feature: gene Location: 2948782-2950026 bp Ori: APX20743.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2948986-2949643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2948986-2949643 bp Feature: domain Description: GIIM Note: maturase Location: 2949724-2949940 bp Feature: domain Description: GIIM Note: maturase Location: 2949724-2949940 bp Feature: gene Location: 2950557-2950850 bp Ori: APX20744.1 Feature: domain Description: InsE Location: 2950569-2950830 bp Feature: domain Description: InsE Location: 2950569-2950830 bp Feature: gene Location: 2951384-2952193 bp Ori: APX20745.1 Feature: domain Description: AbiJ_NTD4 Location: 2951387-2951840 bp Feature: domain Description: AbiJ_NTD4 Location: 2951 387-2951 840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261), PAS_4 (pfam08448), LuxR_C_like (cd06170)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), AbiJ_NTD4 (pfam18863)