myRT

myRT report for GCA_001975125.1_ASM197512v1

Download annotations/find similar RTs

Seq: CP017051.1 Burkholderia pseudomallei strain MSHR4083 chromosome 2, complete sequence (3380426 bp)
Overview 1 RT 1: 1101626-1107934 bp 2 RT 2: 1539279-1543683 bp Neighborhood of RT #1 [1101626, 1108395] Tra5 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 rve Neighborhood of RT #2 [1539279, 1543715] PRiA4_ORF3 DDE_Tnp_IS66 RVT-GII GIIM COG3436 TnpB_IS66 Feature: gene Location: 1101626-1102453 bp Ori: APZ21446.1 Feature: domain Description: Tra5 Location: 1101638-1102406 bp Feature: domain Description: Tra5 Location: 1 1 01 638-1 1 02406 bp Feature: gene Location: 1103445-1104386 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1103448-1104231 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 03448-1 1 04231 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1104252-1104363 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 04252-1 1 04363 bp Feature: gene Location: 1104444-1105706 bp Ori: APZ21447.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1104648-1105305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 04648-1 1 05305 bp Feature: domain Description: GIIM Note: maturase Location: 1105383-1105599 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 05383-1 1 05599 bp Feature: gene Location: 1106248-1106859 bp Feature: domain Description: COG3436 Location: 1106557-1106860 bp Feature: domain Description: COG3436 Location: 1 1 06557-1 1 06860 bp Feature: gene Location: 1107166-1108395 bp Feature: domain Description: rve Location: 1107556-1107934 bp Feature: domain Description: rve Location: 1 1 07556-1 1 07934 bp Feature: gene Location: 1539279-1539875 bp Ori: APZ21790.1 Feature: domain Description: PRiA4_ORF3 Location: 1539303-1539822 bp Feature: domain Description: PRiA4_ORF3 Location: 1 539303-1 539822 bp Feature: gene Location: 1539916-1540892 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1539934-1540285 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 539934-1 540285 bp Feature: gene Location: 1540929-1542191 bp Ori: APZ21791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1541133-1541790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 541 1 33-1 541 790 bp Feature: domain Description: GIIM Note: maturase Location: 1541868-1542084 bp Feature: domain Description: GIIM Note: maturase Location: 1 541 868-1 542084 bp Feature: gene Location: 1542733-1543338 bp Feature: domain Description: COG3436 Location: 1543030-1543339 bp Feature: domain Description: COG3436 Location: 1 543030-1 543339 bp Feature: gene Location: 1543368-1543715 bp Ori: APZ21792.1 Feature: domain Description: TnpB_IS66 Location: 1543395-1543683 bp Feature: domain Description: TnpB_IS66 Location: 1 543395-1 543683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), rve (pfam00665), PRiA4_ORF3 (pfam07929), TnpB_IS66 (pfam05717)