myRT

myRT report for GCA_001975145.1_ASM197514v1

Download annotations/find similar RTs

Seq: CP017053.1 Burkholderia pseudomallei strain MSHR3763 chromosome 2, complete sequence (3380273 bp)
Overview 1 RT 1: 1101654-1107962 bp 2 RT 2: 1539305-1543709 bp Neighborhood of RT #1 [1101654, 1108423] Tra5 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 rve Neighborhood of RT #2 [1539305, 1543741] PRiA4_ORF3 DDE_Tnp_IS66 RVT-GII GIIM COG3436 TnpB_IS66 Feature: gene Location: 1101654-1102481 bp Ori: APZ27646.1 Feature: domain Description: Tra5 Location: 1101666-1102434 bp Feature: domain Description: Tra5 Location: 1 1 01 666-1 1 02434 bp Feature: gene Location: 1103473-1104414 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1103476-1104259 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 03476-1 1 04259 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1104280-1104391 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 04280-1 1 04391 bp Feature: gene Location: 1104472-1105734 bp Ori: APZ27647.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1104676-1105333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 04676-1 1 05333 bp Feature: domain Description: GIIM Note: maturase Location: 1105411-1105627 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 0541 1 -1 1 05627 bp Feature: gene Location: 1106276-1106887 bp Feature: domain Description: COG3436 Location: 1106585-1106888 bp Feature: domain Description: COG3436 Location: 1 1 06585-1 1 06888 bp Feature: gene Location: 1107194-1108423 bp Feature: domain Description: rve Location: 1107584-1107962 bp Feature: domain Description: rve Location: 1 1 07584-1 1 07962 bp Feature: gene Location: 1539305-1539901 bp Ori: APZ27988.1 Feature: domain Description: PRiA4_ORF3 Location: 1539329-1539848 bp Feature: domain Description: PRiA4_ORF3 Location: 1 539329-1 539848 bp Feature: gene Location: 1539942-1540918 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1539960-1540311 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 539960-1 54031 1 bp Feature: gene Location: 1540955-1542217 bp Ori: APZ27989.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1541159-1541816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 541 1 59-1 541 81 6 bp Feature: domain Description: GIIM Note: maturase Location: 1541894-1542110 bp Feature: domain Description: GIIM Note: maturase Location: 1 541 894-1 5421 1 0 bp Feature: gene Location: 1542759-1543364 bp Feature: domain Description: COG3436 Location: 1543056-1543365 bp Feature: domain Description: COG3436 Location: 1 543056-1 543365 bp Feature: gene Location: 1543394-1543741 bp Ori: APZ27990.1 Feature: domain Description: TnpB_IS66 Location: 1543421-1543709 bp Feature: domain Description: TnpB_IS66 Location: 1 543421 -1 543709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), rve (pfam00665), PRiA4_ORF3 (pfam07929), TnpB_IS66 (pfam05717)