myRT

myRT report for GCA_001983975.1_ASM198397v1

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Seq: CP019458.1 Streptomyces autolyticus strain CGMCC0516, complete genome (10029028 bp)
Overview 1 RT 1: 8493141-8503071 bp Neighborhood of RT #1 [8493141, 8505191] GIIM KOG4768 RVT-GII Intron_maturas2 HNHc pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE pPIWI_RE_Z SF2-N Feature: gene Location: 8493141-8493620 bp Feature: domain Description: GIIM Note: maturase Location: 8493258-8493480 bp Feature: domain Description: GIIM Note: maturase Location: 8493258-8493480 bp Feature: gene Location: 8494744-8496422 bp Feature: domain Description: KOG4768 Location: 8494750-8494924 bp Feature: domain Description: KOG4768 Location: 8494750-8494924 bp Feature: gene Location: 8496621-8498411 bp Ori: AQA14846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8496885-8497680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8496885-8497680 bp Feature: domain Description: Intron_maturas2 Location: 8497782-8498013 bp Feature: domain Description: Intron_maturas2 Location: 8497782-849801 3 bp Feature: domain Description: HNHc Note: nucleases Location: 8498181-8498367 bp Feature: domain Description: HNHc Note: nucleases Location: 84981 81 -8498367 bp Feature: gene Location: 8498971-8501679 bp Ori: AQA14847.1 Feature: domain Description: pPIWI_RE_X Location: 8498998-8500216 bp Feature: domain Description: pPIWI_RE_X Location: 8498998-850021 6 bp Feature: domain Description: MID_pPIWI_RE Location: 8500399-8500732 bp Feature: domain Description: MID_pPIWI_RE Location: 8500399-8500732 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 8500768-8501656 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 8500768-8501 656 bp Feature: gene Location: 8501667-8505191 bp Ori: AQA14848.1 Feature: domain Description: pPIWI_RE_Z Location: 8501742-8502219 bp Feature: domain Description: pPIWI_RE_Z Location: 8501 742-850221 9 bp Feature: domain Description: SF2-N Location: 8502408-8503071 bp Feature: domain Description: SF2-N Location: 8502408-8503071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, pPIWI_RE_Z (pfam18155), SF2-N (cd00046)