myRT

myRT report for GCA_001989475.1_ASM198947v1

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Seq: CP014759.1 Legionella pneumophila strain F4468 chromosome, complete genome (3439438 bp)
Overview 1 RT 1: 2312435-2319187 bp 2 RT 2: 2946729-2951838 bp Neighborhood of RT #1 [2312435, 2319187] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Neighborhood of RT #2 [2946729, 2952191] PAS_4 LuxR_C_like PHA02517 RVT-GII GIIM InsE AbiJ_NTD4 Feature: gene Location: 2312435-2312812 bp Ori: AQL12413.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2312462-2312798 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 231 2462-231 2798 bp Feature: gene Location: 2313118-2314569 bp Ori: AQL12414.1 Feature: domain Description: Tnp_DNA_bind Location: 2313157-2313325 bp Feature: domain Description: Tnp_DNA_bind Location: 231 31 57-231 3325 bp Feature: domain Description: DDE_Tnp_1 Location: 2313982-2314276 bp Feature: domain Description: DDE_Tnp_1 Location: 231 3982-231 4276 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2314282-2314561 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 231 4282-231 4561 bp Feature: gene Location: 2314640-2316160 bp Ori: AQL12415.1 Feature: domain Description: RVT_N Location: 2314697-2314940 bp Feature: domain Description: RVT_N Location: 231 4697-231 4940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314985-2315609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 4985-231 5609 bp Feature: domain Description: GIIM Note: maturase Location: 2315660-2315894 bp Feature: domain Description: GIIM Note: maturase Location: 231 5660-231 5894 bp Feature: gene Location: 2317008-2317382 bp Ori: AQL12416.1 Feature: domain Description: Tra_M Location: 2317056-2317251 bp Feature: domain Description: Tra_M Location: 231 7056-231 7251 bp Feature: gene Location: 2317580-2319187 bp Feature: gene Location: 2946729-2947412 bp Ori: AQL12918.1 Feature: domain Description: PAS_4 Location: 2946786-2947071 bp Feature: domain Description: PAS_4 Location: 2946786-2947071 bp Feature: domain Description: LuxR_C_like Location: 2947191-2947347 bp Feature: domain Description: LuxR_C_like Location: 29471 91 -2947347 bp Feature: gene Location: 2947805-2948632 bp Ori: AQL12919.1 Feature: domain Description: PHA02517 Location: 2947820-2948606 bp Feature: domain Description: PHA0251 7 Location: 2947820-2948606 bp Feature: gene Location: 2948780-2950024 bp Ori: AQL12920.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2948984-2949641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2948984-2949641 bp Feature: domain Description: GIIM Note: maturase Location: 2949722-2949938 bp Feature: domain Description: GIIM Note: maturase Location: 2949722-2949938 bp Feature: gene Location: 2950555-2950848 bp Ori: AQL12921.1 Feature: domain Description: InsE Location: 2950567-2950828 bp Feature: domain Description: InsE Location: 2950567-2950828 bp Feature: gene Location: 2951382-2952191 bp Ori: AQL12922.1 Feature: domain Description: AbiJ_NTD4 Location: 2951385-2951838 bp Feature: domain Description: AbiJ_NTD4 Location: 2951 385-2951 838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261), PAS_4 (pfam08448), LuxR_C_like (cd06170)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), AbiJ_NTD4 (pfam18863)