myRT

myRT report for GCA_001989535.1_ASM198953v1

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Seq: CP017289.1 Klebsiella variicola strain GJ3 chromosome, complete genome (5599927 bp)
Overview 1 RT 1: 3789060-3796223 bp Neighborhood of RT #1 [3789060, 3796228] TagH Wzt_C-like TagG RVT_N RVT-GII GIIM HNHc PRK15414 GMP_PMI Feature: gene Location: 3789060-3790274 bp Ori: AQL27845.1 Feature: domain Description: TagH Location: 3789069-3789798 bp Feature: domain Description: TagH Location: 3789069-3789798 bp Feature: domain Description: Wzt_C-like Location: 3789837-3790260 bp Feature: domain Description: Wzt_C-like Location: 3789837-3790260 bp Feature: gene Location: 3790274-3791068 bp Ori: AQL27846.1 Feature: domain Description: TagG Location: 3790295-3791063 bp Feature: domain Description: TagG Location: 3790295-3791 063 bp Feature: gene Location: 3791232-3792899 bp Ori: AQL27847.1 Feature: domain Description: RVT_N Location: 3791280-3791517 bp Feature: domain Description: RVT_N Location: 3791 280-3791 51 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3791568-3792210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3791 568-379221 0 bp Feature: domain Description: GIIM Note: maturase Location: 3792261-3792495 bp Feature: domain Description: GIIM Note: maturase Location: 3792261 -3792495 bp Feature: domain Description: HNHc Note: nucleases Location: 3792705-3792864 bp Feature: domain Description: HNHc Note: nucleases Location: 3792705-3792864 bp Feature: gene Location: 3793473-3794789 bp Ori: AQL27848.1 Feature: domain Description: PRK15414 Location: 3793476-3794781 bp Feature: domain Description: PRK1 541 4 Location: 3793476-3794781 bp Feature: gene Location: 3794813-3796228 bp Ori: AQL27849.1 Feature: domain Description: GMP_PMI Location: 3794819-3796223 bp Feature: domain Description: GMP_PMI Location: 379481 9-3796223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TagH (COG1134), Wzt_C-like (cl15685), TagG (COG1682), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK15414 (phosphomannomutase), GMP_PMI (TIGR01479)

Seq: CP017287.1 Klebsiella variicola strain GJ3 plasmid pKPGJ-3c, complete sequence (73385 bp)
Overview 1 RT 1: 40774-45671 bp Neighborhood of RT #1 [40774, 46408] DUF1380 RVT_N RVT-GII GIIM HNHc DUF3560 Feature: gene Location: 40774-41196 bp Ori: AQL24478.1 Feature: domain Description: DUF1380 Location: 40777-41071 bp Feature: domain Description: DUF1380 Location: 40777-41071 bp Feature: gene Location: 41193-41384 bp Feature: gene Location: 41698-43365 bp Ori: AQL24480.1 Feature: domain Description: RVT_N Location: 41746-41983 bp Feature: domain Description: RVT_N Location: 41746-41983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42034-42676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 034-42 676 bp Feature: domain Description: GIIM Note: maturase Location: 42727-42961 bp Feature: domain Description: GIIM Note: maturase Location: 42 72 7-42 961 bp Feature: domain Description: HNHc Note: nucleases Location: 43171-43330 bp Feature: domain Description: HNHc Note: nucleases Location: 43171-43330 bp Feature: gene Location: 44765-44995 bp Feature: gene Location: 45047-46408 bp Ori: AQL24482.1 Feature: domain Description: DUF3560 Location: 45314-45671 bp Feature: domain Description: DUF3560 Location: 45314-45671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF3560 (pfam12083)