myRT

myRT report for GCA_001990145.1_ASM199014v1

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Seq: CP017406.1 Lactobacillus plantarum strain RI-113 chromosome, complete genome (3249180 bp)
Overview 1 RT 1: 1423060-1427898 bp 2 RT 2: 1729594-1735213 bp Neighborhood of RT #1 [1423060, 1427903] P-type_ATPase_H GIIM RVT-GII RVT-GII COG4932 Neighborhood of RT #2 [1729594, 1735213] PRK06481 fumC RVT-GII GIIM RVT-GII Feature: gene Location: 1423060-1425333 bp Feature: domain Description: P-type_ATPase_H Location: 1423090-1425298 bp Feature: domain Description: P-type_ATPase_H Location: 1 423090-1 425298 bp Feature: gene Location: 1425546-1425932 bp Feature: domain Description: GIIM Note: maturase Location: 1425552-1425702 bp Feature: domain Description: GIIM Note: maturase Location: 1 425552-1 425702 bp Feature: gene Location: 1426116-1426415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1426119-1426404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4261 1 9-1 426404 bp Feature: gene Location: 1426438-1426743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1426546-1426735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 426546-1 426735 bp Feature: gene Location: 1427451-1427708 bp Feature: gene Location: 1427763-1427903 bp Feature: domain Description: COG4932 Location: 1427769-1427898 bp Feature: domain Description: COG4932 Location: 1 427769-1 427898 bp Feature: gene Location: 1729594-1730982 bp Feature: domain Description: PRK06481 Location: 1729633-1730974 bp Feature: domain Description: PRK06481 Location: 1 729633-1 730974 bp Feature: gene Location: 1731155-1732537 bp Feature: domain Description: fumC Location: 1731158-1732526 bp Feature: domain Description: fumC Location: 1 731 1 58-1 732526 bp Feature: gene Location: 1733012-1734007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1733018-1733561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 73301 8-1 733561 bp Feature: domain Description: GIIM Note: maturase Location: 1733615-1733834 bp Feature: domain Description: GIIM Note: maturase Location: 1 73361 5-1 733834 bp Feature: gene Location: 1734011-1734184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734119-1734182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7341 1 9-1 7341 82 bp Feature: gene Location: 1734246-1734398 bp Feature: gene Location: 1734977-1735213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_H (cd02076), GIIM (pfam08388), RVT-GII, COG4932 (Uncharacterized surface anchored protein ), PRK06481 (flavocytochrome c), fumC (PRK00485)