myRT

myRT report for GCA_001998865.1_ASM199886v1

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Seq: CP019607.1 Tessaracoccus flavescens strain SST-39T, complete genome (3603805 bp)
Overview 1 RT 1: 372179-376438 bp 2 RT 2: 1069868-1073934 bp 3 RT 3: 1309203-1314690 bp 4 RT 4: 1686821-1692404 bp 5 RT 5: 2084073-2086924 bp 6 RT 6: 3284806-3290277 bp Neighborhood of RT #1 [372179, 376438] DDE_Tnp_ISL3 RVT-GII zf-ISL3 HTH_Tnp_ISL3 Neighborhood of RT #2 [1069868, 1073984] zf-ISL3 zf-ISL3 HTH_Tnp_ISL3 RVT-GII GIIM DDE_Tnp_ISL3 Neighborhood of RT #3 [1309203, 1314782] Phage_int_SAM_1 INT_RitC_C_like DDE_Tnp_ISL3 RVT-GII GIIM zf-ISL3 PRK11898 Neighborhood of RT #4 [1686821, 1692777] Transposase_mut RVT-GII Transposase_mut Transposase_mut COG3547 Neighborhood of RT #5 [2084073, 2087001] PHA02517 InsE RVT-GII GIIM DDE_Tnp_ISL3 INT_RitC_C_like Neighborhood of RT #6 [3284806, 3290354] IbpA zf-ISL3 RVT-GII GIIM DDE_Tnp_ISL3 Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 372179-372472 bp Feature: gene Location: 372602-373375 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 372647-373346 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 372647-373346 bp Feature: gene Location: 373516-374983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373858-374422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373858-374422 bp Feature: gene Location: 375507-376109 bp Ori: AQP49756.1 Feature: domain Description: zf-ISL3 Location: 375654-375780 bp Feature: domain Description: zf-ISL3 Location: 375654-375780 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 375834-375960 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 375834-375960 bp Feature: gene Location: 376217-376438 bp Feature: gene Location: 1069868-1070371 bp Feature: domain Description: zf-ISL3 Location: 1070006-1070132 bp Feature: domain Description: zf-ISL3 Location: 1 070006-1 0701 32 bp Feature: gene Location: 1070499-1071017 bp Feature: domain Description: zf-ISL3 Location: 1070634-1070763 bp Feature: domain Description: zf-ISL3 Location: 1 070634-1 070763 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1070796-1070928 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 070796-1 070928 bp Feature: gene Location: 1071607-1073073 bp Ori: AQP50329.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1071949-1072633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 071 949-1 072633 bp Feature: domain Description: GIIM Note: maturase Location: 1072705-1072936 bp Feature: domain Description: GIIM Note: maturase Location: 1 072705-1 072936 bp Feature: gene Location: 1073025-1073207 bp Feature: gene Location: 1073190-1073984 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1073202-1073934 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 073202-1 073934 bp Feature: gene Location: 1309203-1310180 bp Ori: AQP50510.1 Feature: domain Description: Phage_int_SAM_1 Location: 1309257-1309473 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 309257-1 309473 bp Feature: domain Description: INT_RitC_C_like Location: 1309560-1310103 bp Feature: domain Description: INT_RitC_C_like Location: 1 309560-1 31 01 03 bp Feature: gene Location: 1310249-1311037 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1310261-1310987 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 31 0261 -1 31 0987 bp Feature: gene Location: 1311154-1312620 bp Ori: AQP50511.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1311496-1312180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 496-1 31 21 80 bp Feature: domain Description: GIIM Note: maturase Location: 1312252-1312483 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 2252-1 31 2483 bp Feature: gene Location: 1313211-1313728 bp Feature: domain Description: zf-ISL3 Location: 1313346-1313472 bp Feature: domain Description: zf-ISL3 Location: 1 31 3346-1 31 3472 bp Feature: gene Location: 1313874-1314782 bp Ori: AQP50512.1 Feature: domain Description: PRK11898 Location: 1313883-1314690 bp Feature: domain Description: PRK1 1 898 Location: 1 31 3883-1 31 4690 bp Feature: gene Location: 1686821-1688065 bp Ori: AQP50797.1 Feature: domain Description: Transposase_mut Location: 1686869-1687958 bp Feature: domain Description: Transposase_mut Location: 1 686869-1 687958 bp Feature: gene Location: 1688062-1688253 bp Feature: gene Location: 1689049-1690516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1689391-1689865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 689391 -1 689865 bp Feature: gene Location: 1690669-1691238 bp Feature: domain Description: Transposase_mut Location: 1690675-1690846 bp Feature: domain Description: Transposase_mut Location: 1 690675-1 690846 bp Feature: domain Description: Transposase_mut Location: 1691071-1691161 bp Feature: domain Description: Transposase_mut Location: 1 691 071 -1 691 1 61 bp Feature: gene Location: 1691516-1692777 bp Feature: domain Description: COG3547 Location: 1691570-1692404 bp Feature: domain Description: COG3547 Location: 1 691 570-1 692404 bp Feature: gene Location: 2084073-2084957 bp Ori: AQP51114.1 Feature: domain Description: PHA02517 Location: 2084157-2084922 bp Feature: domain Description: PHA0251 7 Location: 20841 57-2084922 bp Feature: gene Location: 2084954-2085247 bp Ori: AQP51115.1 Feature: domain Description: InsE Location: 2084969-2085236 bp Feature: domain Description: InsE Location: 2084969-2085236 bp Feature: gene Location: 2085286-2086143 bp Ori: AQP51116.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2085316-2085703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208531 6-2085703 bp Feature: domain Description: GIIM Note: maturase Location: 2085775-2086006 bp Feature: domain Description: GIIM Note: maturase Location: 2085775-2086006 bp Feature: gene Location: 2086260-2086541 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2086305-2086539 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2086305-2086539 bp Feature: gene Location: 2086621-2087001 bp Ori: AQP51117.1 Feature: domain Description: INT_RitC_C_like Location: 2086648-2086924 bp Feature: domain Description: INT_RitC_C_like Location: 2086648-2086924 bp Feature: gene Location: 3284806-3285489 bp Ori: AQP52109.1 Feature: domain Description: IbpA Location: 3284830-3285190 bp Feature: domain Description: IbpA Location: 3284830-32851 90 bp Feature: gene Location: 3285676-3286233 bp Feature: domain Description: zf-ISL3 Location: 3285853-3285979 bp Feature: domain Description: zf-ISL3 Location: 3285853-3285979 bp Feature: gene Location: 3286824-3288290 bp Ori: AQP52110.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3287166-3287850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32871 66-3287850 bp Feature: domain Description: GIIM Note: maturase Location: 3287922-3288153 bp Feature: domain Description: GIIM Note: maturase Location: 3287922-32881 53 bp Feature: gene Location: 3288587-3289202 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3288590-3288992 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3288590-3288992 bp Feature: gene Location: 3289383-3290354 bp Ori: AQP52683.1 Feature: domain Description: Phage_int_SAM_1 Location: 3289389-3289647 bp Feature: domain Description: Phage_int_SAM_1 Location: 3289389-3289647 bp Feature: domain Description: INT_RitC_C_like Location: 3289734-3290277 bp Feature: domain Description: INT_RitC_C_like Location: 3289734-3290277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), PRK11898 (prephenate dehydratase; Provisional), Transposase_mut (pfam00872), COG3547 (Transposase )
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), IbpA (COG0071)