myRT

myRT report for GCA_002002885.1_ASM200288v1

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Seq: CP019510.1 Janthinobacterium sp. LM6 chromosome, complete genome (6288464 bp)
Overview 1 RT 1: 6126406-6134946 bp Neighborhood of RT #1 [6126406, 6134981] PRK10770 LptD RVT_N RVT-GII GIIM HNHc COG3178 NTP_transferase_like_1 Feature: gene Location: 6126406-6127824 bp Ori: AQR71560.1 Feature: domain Description: PRK10770 Location: 6126592-6127807 bp Feature: domain Description: PRK1 0770 Location: 61 26592-61 27807 bp Feature: gene Location: 6127913-6130159 bp Ori: AQR71561.1 Feature: domain Description: LptD Location: 6127967-6130070 bp Feature: domain Description: LptD Location: 61 27967-61 30070 bp Feature: gene Location: 6131304-6133007 bp Ori: AQR71562.1 Feature: domain Description: RVT_N Location: 6131364-6131607 bp Feature: domain Description: RVT_N Location: 61 31 364-61 31 607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6131652-6132300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 31 652-61 32300 bp Feature: domain Description: GIIM Note: maturase Location: 6132351-6132585 bp Feature: domain Description: GIIM Note: maturase Location: 61 32351 -61 32585 bp Feature: domain Description: HNHc Note: nucleases Location: 6132819-6132969 bp Feature: domain Description: HNHc Note: nucleases Location: 61 3281 9-61 32969 bp Feature: gene Location: 6133132-6134199 bp Ori: AQR71563.1 Feature: domain Description: COG3178 Location: 6133159-6134173 bp Feature: domain Description: COG31 78 Location: 61 331 59-61 341 73 bp Feature: gene Location: 6134262-6134981 bp Ori: AQR71564.1 Feature: domain Description: NTP_transferase_like_1 Location: 6134268-6134946 bp Feature: domain Description: NTP_transferase_like_1 Location: 61 34268-61 34946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)