myRT

myRT report for GCA_002007625.1_ASM200762v1

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Seq: CP019208.1 Enterococcus faecium strain 2014-VREF-41 chromosome, complete genome (3009007 bp)
Overview 1 RT 1: 409339-416021 bp 2 RT 2: 2384676-2389866 bp Neighborhood of RT #1 [409339, 416098] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA PHP_HisPPase SMC_prok_B SMC_prok_B Neighborhood of RT #2 [2384676, 2389943] TcpE ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 409339-410523 bp Ori: AQT55902.1 Feature: domain Description: HTH_XRE Location: 409369-409513 bp Feature: domain Description: HTH_XRE Location: 409369-40951 3 bp Feature: domain Description: Rol_Rep_N Location: 409546-409810 bp Feature: domain Description: Rol_Rep_N Location: 409546-40981 0 bp Feature: domain Description: Rep_trans Location: 409834-410446 bp Feature: domain Description: Rep_trans Location: 409834-41 0446 bp Feature: gene Location: 410520-410657 bp Ori: AQT55903.1 Feature: domain Description: DUF3789 Location: 410547-410640 bp Feature: domain Description: DUF3789 Location: 41 0547-41 0640 bp Feature: gene Location: 411403-413313 bp Ori: AQT55904.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411736-412474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 736-41 2474 bp Feature: domain Description: HNHc Note: nucleases Location: 413029-413194 bp Feature: domain Description: HNHc Note: nucleases Location: 41 3029-41 31 94 bp Feature: gene Location: 413654-414154 bp Ori: AQT55905.1 Feature: domain Description: ArdA Location: 413672-414143 bp Feature: domain Description: ArdA Location: 41 3672-41 41 43 bp Feature: gene Location: 414251-416098 bp Ori: AQT55906.1 Feature: domain Description: PHP_HisPPase Location: 414278-414755 bp Feature: domain Description: PHP_HisPPase Location: 41 4278-41 4755 bp Feature: domain Description: SMC_prok_B Location: 415157-415256 bp Feature: domain Description: SMC_prok_B Location: 41 51 57-41 5256 bp Feature: domain Description: SMC_prok_B Location: 415586-416021 bp Feature: domain Description: SMC_prok_B Location: 41 5586-41 6021 bp Feature: gene Location: 2384676-2385065 bp Ori: AQT57794.1 Feature: domain Description: TcpE Location: 2384694-2384994 bp Feature: domain Description: TcpE Location: 2384694-2384994 bp Feature: gene Location: 2385125-2385628 bp Ori: AQT57795.1 Feature: domain Description: ArdA Location: 2385143-2385614 bp Feature: domain Description: ArdA Location: 23851 43-238561 4 bp Feature: gene Location: 2385969-2387879 bp Ori: AQT57796.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386302-2387040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386302-2387040 bp Feature: domain Description: HNHc Note: nucleases Location: 2387595-2387760 bp Feature: domain Description: HNHc Note: nucleases Location: 2387595-2387760 bp Feature: gene Location: 2388625-2388762 bp Ori: AQT57797.1 Feature: domain Description: DUF3789 Location: 2388652-2388745 bp Feature: domain Description: DUF3789 Location: 2388652-2388745 bp Feature: gene Location: 2388759-2389943 bp Ori: AQT57798.1 Feature: domain Description: HTH_XRE Location: 2388789-2388933 bp Feature: domain Description: HTH_XRE Location: 2388789-2388933 bp Feature: domain Description: Rol_Rep_N Location: 2388966-2389230 bp Feature: domain Description: Rol_Rep_N Location: 2388966-2389230 bp Feature: domain Description: Rep_trans Location: 2389254-2389866 bp Feature: domain Description: Rep_trans Location: 2389254-2389866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275), PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), TcpE (pfam12648)