myRT

myRT report for GCA_002007645.1_ASM200764v1

Download annotations/find similar RTs

Seq: CP019791.1 Phycisphaerae bacterium ST-NAGAB-D1, complete genome (4250973 bp)
Overview 1 RT 1: 1108330-1112788 bp 2 RT 2: 2301418-2305476 bp 3 RT 3: 2333109-2349232 bp Neighborhood of RT #1 [1108330, 1113318] RVT-GII Transposase_mut PulG Neighborhood of RT #2 [2301418, 2305610] RVT-GII Phage_int_SAM_5 INT_ICEBs1_C_like Neighborhood of RT #3 [2333109, 2349399] Beta_helix Beta_helix Beta_helix Beta_helix NosD Beta_helix Beta_helix Beta_helix Beta_helix Beta_helix RVT-GII Transposase_mut Ig_3 Laminin_G_3 Feature: gene Location: 1108330-1108755 bp Feature: gene Location: 1108815-1109156 bp Feature: gene Location: 1109156-1110730 bp Ori: AQT67842.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109573-1110263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 09573-1 1 1 0263 bp Feature: gene Location: 1110810-1112033 bp Ori: AQT67843.1 Feature: domain Description: Transposase_mut Location: 1110855-1111938 bp Feature: domain Description: Transposase_mut Location: 1 1 1 0855-1 1 1 1 938 bp Feature: gene Location: 1112464-1113318 bp Ori: AQT67844.1 Gene: xcpT_2 Feature: domain Description: PulG Location: 1112470-1112788 bp Feature: domain Description: PulG Location: 1 1 1 2470-1 1 1 2788 bp Feature: gene Location: 2301418-2301708 bp Feature: gene Location: 2301981-2302322 bp Feature: gene Location: 2302322-2303896 bp Ori: AQT68776.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302739-2303429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302739-2303429 bp Feature: gene Location: 2303976-2304068 bp Feature: gene Location: 2304390-2305610 bp Ori: AQT68778.1 Gene: xerD_2 Feature: domain Description: Phage_int_SAM_5 Location: 2304591-2304861 bp Feature: domain Description: Phage_int_SAM_5 Location: 2304591 -2304861 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2304921-2305476 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 2304921 -2305476 bp Feature: gene Location: 2333109-2343662 bp Ori: AQT68805.1 Feature: domain Description: Beta_helix Location: 2333274-2333736 bp Feature: domain Description: Beta_helix Location: 2333274-2333736 bp Feature: domain Description: Beta_helix Location: 2335002-2335422 bp Feature: domain Description: Beta_helix Location: 2335002-2335422 bp Feature: domain Description: Beta_helix Location: 2336637-2337012 bp Feature: domain Description: Beta_helix Location: 2336637-233701 2 bp Feature: domain Description: Beta_helix Location: 2337942-2338392 bp Feature: domain Description: Beta_helix Location: 2337942-2338392 bp Feature: domain Description: NosD Location: 2338488-2338668 bp Feature: domain Description: NosD Location: 2338488-2338668 bp Feature: domain Description: Beta_helix Location: 2339565-2339763 bp Feature: domain Description: Beta_helix Location: 2339565-2339763 bp Feature: domain Description: Beta_helix Location: 2339793-2340189 bp Feature: domain Description: Beta_helix Location: 2339793-23401 89 bp Feature: domain Description: Beta_helix Location: 2341350-2341653 bp Feature: domain Description: Beta_helix Location: 2341 350-2341 653 bp Feature: domain Description: Beta_helix Location: 2341677-2342031 bp Feature: domain Description: Beta_helix Location: 2341 677-2342031 bp Feature: domain Description: Beta_helix Location: 2342640-2343117 bp Feature: domain Description: Beta_helix Location: 2342640-23431 1 7 bp Feature: gene Location: 2343954-2344295 bp Feature: gene Location: 2344295-2345869 bp Ori: AQT68807.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2344712-2345402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234471 2-2345402 bp Feature: gene Location: 2345949-2347172 bp Ori: AQT68808.1 Feature: domain Description: Transposase_mut Location: 2345994-2347077 bp Feature: domain Description: Transposase_mut Location: 2345994-2347077 bp Feature: gene Location: 2347816-2349399 bp Ori: AQT68809.1 Feature: domain Description: Ig_3 Location: 2348323-2348569 bp Feature: domain Description: Ig_3 Location: 2348323-2348569 bp Feature: domain Description: Laminin_G_3 Location: 2348782-2349232 bp Feature: domain Description: Laminin_G_3 Location: 2348782-2349232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_mut (pfam00872), PulG (pfam11773), Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), Beta_helix (pfam13229), NosD (pfam05048), Ig_3 (pfam13927), Laminin_G_3 (pfam13385)