myRT

myRT report for GCA_002007885.1_ASM200788v1

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Seq: CP019870.1 Clostridioides difficile strain BR81, complete genome (4124384 bp)
Overview 1 RT 1: 1567401-1572504 bp Neighborhood of RT #1 [1567401, 1572504] Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc Acetyltransf_10 Feature: gene Location: 1567401-1568522 bp Ori: AQU09355.1 Feature: domain Description: Rol_Rep_N Location: 1567530-1567791 bp Feature: domain Description: Rol_Rep_N Location: 1 567530-1 567791 bp Feature: domain Description: Rep_trans Location: 1567815-1568430 bp Feature: domain Description: Rep_trans Location: 1 56781 5-1 568430 bp Feature: gene Location: 1568529-1568663 bp Ori: AQU09356.1 Feature: domain Description: DUF3789 Location: 1568541-1568634 bp Feature: domain Description: DUF3789 Location: 1 568541 -1 568634 bp Feature: gene Location: 1569405-1571315 bp Ori: AQU09357.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569738-1570476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 569738-1 570476 bp Feature: domain Description: HNHc Note: nucleases Location: 1571031-1571196 bp Feature: domain Description: HNHc Note: nucleases Location: 1 571 031 -1 571 1 96 bp Feature: gene Location: 1571721-1572101 bp Ori: AQU09358.1 Feature: domain Description: Acetyltransf_10 Location: 1571811-1572072 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 571 81 1 -1 572072 bp Feature: gene Location: 1572208-1572504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), Acetyltransf_10 (pfam13673)