myRT

myRT report for GCA_002009195.1_ASM200919v1

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Seq: CP018874.1 Bacillus megaterium strain JX285 chromosome, complete genome (5066463 bp)
Overview 1 RT 1: 1781397-1786492 bp Neighborhood of RT #1 [1781397, 1786503] RVT_N RVT-GII GIIM AcrR TetR_C_8 fabG Feature: gene Location: 1781397-1781879 bp Feature: gene Location: 1781960-1782328 bp Feature: gene Location: 1782573-1784222 bp Ori: AQU73424.1 Feature: domain Description: RVT_N Location: 1782621-1782867 bp Feature: domain Description: RVT_N Location: 1 782621 -1 782867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1782921-1783581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 782921 -1 783581 bp Feature: domain Description: GIIM Note: maturase Location: 1783650-1783881 bp Feature: domain Description: GIIM Note: maturase Location: 1 783650-1 783881 bp Feature: gene Location: 1784953-1785570 bp Ori: AQU73425.1 Feature: domain Description: AcrR Location: 1784983-1785172 bp Feature: domain Description: AcrR Location: 1 784983-1 7851 72 bp Feature: domain Description: TetR_C_8 Location: 1785244-1785517 bp Feature: domain Description: TetR_C_8 Location: 1 785244-1 78551 7 bp Feature: gene Location: 1785766-1786503 bp Ori: AQU73426.1 Feature: domain Description: fabG Location: 1785775-1786492 bp Feature: domain Description: fabG Location: 1 785775-1 786492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AcrR (COG1309), TetR_C_8 (pfam14278), fabG (PRK12825)

Seq: CP018876.1 Bacillus megaterium strain JX285 plasmid 3, complete sequence (134795 bp)
Overview 1 RT 1: 53593-59082 bp 2 RT 2: 98668-105593 bp Neighborhood of RT #1 [53593, 59090] EamA EamA CDO_I RVT_N RVT-GII GIIM HxlR MdaB Neighborhood of RT #2 [98668, 105593] TrkA_N spore_ger_x_C RVT_N RVT-GII GIIM Feature: gene Location: 53593-54522 bp Ori: AQU76906.1 Feature: domain Description: EamA Location: 53626-54022 bp Feature: domain Description: EamA Location: 5362 6-5402 2 bp Feature: domain Description: EamA Location: 54061-54469 bp Feature: domain Description: EamA Location: 54061-54469 bp Feature: gene Location: 54573-55133 bp Ori: AQU76982.1 Feature: domain Description: CDO_I Location: 54705-55029 bp Feature: domain Description: CDO_I Location: 54705-5502 9 bp Feature: gene Location: 56187-57836 bp Ori: AQU76907.1 Feature: domain Description: RVT_N Location: 56235-56481 bp Feature: domain Description: RVT_N Location: 562 35-56481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56535-57195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56535-57195 bp Feature: domain Description: GIIM Note: maturase Location: 57264-57495 bp Feature: domain Description: GIIM Note: maturase Location: 572 64-57495 bp Feature: gene Location: 58131-58490 bp Ori: AQU76908.1 Feature: domain Description: HxlR Location: 58176-58467 bp Feature: domain Description: HxlR Location: 58176-58467 bp Feature: gene Location: 58563-59090 bp Ori: AQU76909.1 Feature: domain Description: MdaB Location: 58569-59082 bp Feature: domain Description: MdaB Location: 58569-59082 bp Feature: gene Location: 98668-99120 bp Ori: AQU76948.1 Feature: domain Description: TrkA_N Location: 98692-99058 bp Feature: domain Description: TrkA_N Location: 98692 -99058 bp Feature: gene Location: 99435-100661 bp Ori: AQU76949.1 Feature: domain Description: spore_ger_x_C Location: 99459-100620 bp Feature: domain Description: spore_ger_x_C Location: 99459-10062 0 bp Feature: gene Location: 102149-103798 bp Ori: AQU76950.1 Feature: domain Description: RVT_N Location: 102197-102443 bp Feature: domain Description: RVT_N Location: 102 197-102 443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102497-103157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 497-103157 bp Feature: domain Description: GIIM Note: maturase Location: 103226-103457 bp Feature: domain Description: GIIM Note: maturase Location: 1032 2 6-103457 bp Feature: gene Location: 104149-104793 bp Feature: gene Location: 105306-105593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EamA (pfam00892), CDO_I (pfam05995), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HxlR (pfam01638), MdaB (COG2249), TrkA_N (pfam02254), spore_ger_x_C (TIGR02887)

Seq: CP018879.1 Bacillus megaterium strain JX285 plasmid 6, complete sequence (37455 bp)
Overview 1 RT 1: 1740-6646 bp Neighborhood of RT #1 [1740, 6646] LolD HTH_XRE RVT_N RVT-GII GIIM Feature: gene Location: 1740-2408 bp Ori: AQU77165.1 Feature: domain Description: LolD Location: 1758-2394 bp Feature: domain Description: LolD Location: 1758-23 94 bp Feature: gene Location: 2783-3004 bp Ori: AQU77166.1 Feature: domain Description: HTH_XRE Location: 2819-2957 bp Feature: domain Description: HTH_XRE Location: 2819-2957 bp Feature: gene Location: 3295-4944 bp Feature: domain Description: RVT_N Location: 3343-3589 bp Feature: domain Description: RVT_N Location: 3 3 43 -3 589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3643-4303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 643 -43 03 bp Feature: domain Description: GIIM Note: maturase Location: 4369-4603 bp Feature: domain Description: GIIM Note: maturase Location: 43 69-4603 bp Feature: gene Location: 5880-6158 bp Feature: gene Location: 6341-6646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CP018877.1 Bacillus megaterium strain JX285 plasmid 4, complete sequence (128297 bp)
Overview 1 RT 1: 30634-35569 bp Neighborhood of RT #1 [30634, 35613] MEDS RVT_N RVT-GII GIIM HTH_11 HTH_XRE Feature: gene Location: 30634-31206 bp Ori: AQU77087.1 Feature: domain Description: MEDS Location: 30682-31141 bp Feature: domain Description: MEDS Location: 30682-3114 1 bp Feature: gene Location: 31561-31821 bp Feature: gene Location: 32228-33877 bp Feature: domain Description: RVT_N Location: 32276-32522 bp Feature: domain Description: RVT_N Location: 32276-32522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32576-33236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32576-33236 bp Feature: domain Description: GIIM Note: maturase Location: 33302-33536 bp Feature: domain Description: GIIM Note: maturase Location: 33302-33536 bp Feature: gene Location: 34176-34634 bp Ori: AQU77010.1 Feature: domain Description: HTH_11 Location: 34203-34290 bp Feature: domain Description: HTH_11 Location: 34 203-34 290 bp Feature: gene Location: 35377-35613 bp Ori: AQU77011.1 Feature: domain Description: HTH_XRE Location: 35428-35569 bp Feature: domain Description: HTH_XRE Location: 354 28-35569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MEDS (pfam14417), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_11 (pfam08279), HTH_XRE (smart00530)