myRT

myRT report for GCA_002011925.2_ASM201192v2

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Seq: CP017758.1 Cupriavidus necator strain NH9 chromosome 2, complete sequence (3395604 bp)
Overview 1 RT 1: 126613-134345 bp 2 RT 2: 398419-402020 bp 3 RT 3: 1003149-1010551 bp 4 RT 4: 3173749-3183740 bp 5 RT 5: 3334511-3338447 bp Neighborhood of RT #1 [126613, 134353] PBP2_Bug_TTT COG3547 RVT-GII GIIM COG3547 YiiM Neighborhood of RT #2 [398419, 402046] HTH_32 RVT-GII Tra5 CheY Neighborhood of RT #3 [1003149, 1010559] RND_mfp CusA RVT-GII GIIM PRK10428 Neighborhood of RT #4 [3173749, 3183763] PBP2_Bug_TTT PRK07487 RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII DUF839 YIH1 Neighborhood of RT #5 [3334511, 3338447] YdeN MFS_ExuT_GudP_like RVT-GII DUF5372 Feature: gene Location: 126613-127635 bp Ori: AQV96284.1 Feature: domain Description: PBP2_Bug_TTT Location: 126742-127615 bp Feature: domain Description: PBP2_Bug_TTT Location: 1 26742-1 2761 5 bp Feature: gene Location: 128350-129480 bp Ori: AQV96285.1 Feature: domain Description: COG3547 Location: 128464-129358 bp Feature: domain Description: COG3547 Location: 1 28464-1 29358 bp Feature: gene Location: 129964-131442 bp Ori: AQV96286.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130375-131062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30375-1 31 062 bp Feature: domain Description: GIIM Note: maturase Location: 131143-131353 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 1 43-1 31 353 bp Feature: gene Location: 131853-132983 bp Ori: AQV96287.1 Feature: domain Description: COG3547 Location: 131967-132861 bp Feature: domain Description: COG3547 Location: 1 31 967-1 32861 bp Feature: gene Location: 133841-134353 bp Ori: AQV96288.1 Feature: domain Description: YiiM Location: 134006-134345 bp Feature: domain Description: YiiM Location: 1 34006-1 34345 bp Feature: gene Location: 398419-398853 bp Feature: domain Description: HTH_32 Location: 398527-398740 bp Feature: domain Description: HTH_32 Location: 398527-398740 bp Feature: gene Location: 399021-399371 bp Feature: gene Location: 399368-400608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399566-400217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399566-40021 7 bp Feature: gene Location: 400688-401296 bp Feature: domain Description: Tra5 Location: 400709-401135 bp Feature: domain Description: Tra5 Location: 400709-401 1 35 bp Feature: gene Location: 401654-402046 bp Ori: AQV96509.1 Feature: domain Description: CheY Location: 401657-402020 bp Feature: domain Description: CheY Location: 401 657-402020 bp Feature: gene Location: 1003149-1004366 bp Ori: AQV97032.1 Feature: domain Description: RND_mfp Location: 1003389-1004313 bp Feature: domain Description: RND_mfp Location: 1 003389-1 00431 3 bp Feature: gene Location: 1004380-1007502 bp Ori: AQV97033.1 Feature: domain Description: CusA Location: 1004383-1007437 bp Feature: domain Description: CusA Location: 1 004383-1 007437 bp Feature: gene Location: 1008007-1009371 bp Ori: AQV97034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008334-1008949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 008334-1 008949 bp Feature: domain Description: GIIM Note: maturase Location: 1009012-1009213 bp Feature: domain Description: GIIM Note: maturase Location: 1 00901 2-1 00921 3 bp Feature: gene Location: 1009677-1010258 bp Feature: gene Location: 1010356-1010559 bp Ori: AQV97036.1 Feature: domain Description: PRK10428 Location: 1010359-1010551 bp Feature: domain Description: PRK1 0428 Location: 1 01 0359-1 01 0551 bp Feature: gene Location: 3173749-3174753 bp Ori: AQV98939.1 Feature: domain Description: PBP2_Bug_TTT Location: 3173860-3174730 bp Feature: domain Description: PBP2_Bug_TTT Location: 31 73860-31 74730 bp Feature: gene Location: 3174792-3176201 bp Ori: AQV98940.1 Feature: domain Description: PRK07487 Location: 3174798-3176187 bp Feature: domain Description: PRK07487 Location: 31 74798-31 761 87 bp Feature: gene Location: 3176334-3177155 bp Ori: AVK72254.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3176349-3176733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 76349-31 76733 bp Feature: domain Description: GIIM Note: maturase Location: 3176796-3176997 bp Feature: domain Description: GIIM Note: maturase Location: 31 76796-31 76997 bp Feature: gene Location: 3177622-3179835 bp Ori: AQV98941.1 Feature: domain Description: PinE Location: 3177670-3178258 bp Feature: domain Description: PinE Location: 31 77670-31 78258 bp Feature: domain Description: Zn_ribbon_recom Location: 3178618-3178786 bp Feature: domain Description: Zn_ribbon_recom Location: 31 7861 8-31 78786 bp Feature: domain Description: HTH_17 Location: 3179497-3179620 bp Feature: domain Description: HTH_1 7 Location: 31 79497-31 79620 bp Feature: domain Description: HTH_17 Location: 3179680-3179794 bp Feature: domain Description: HTH_1 7 Location: 31 79680-31 79794 bp Feature: gene Location: 3179856-3180425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180189-3180426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 801 89-31 80426 bp Feature: gene Location: 3180883-3182868 bp Ori: AQV98942.1 Feature: domain Description: DUF839 Location: 3181531-3182587 bp Feature: domain Description: DUF839 Location: 31 81 531 -31 82587 bp Feature: gene Location: 3183146-3183763 bp Ori: AQV98943.1 Feature: domain Description: YIH1 Location: 3183158-3183740 bp Feature: domain Description: YIH1 Location: 31 831 58-31 83740 bp Feature: gene Location: 3334511-3335104 bp Ori: AQV99072.1 Feature: domain Description: YdeN Location: 3334532-3335081 bp Feature: domain Description: YdeN Location: 3334532-3335081 bp Feature: gene Location: 3335122-3336474 bp Ori: AQV99073.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 3335203-3336382 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 3335203-3336382 bp Feature: gene Location: 3336733-3337744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3336736-3336934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3336736-3336934 bp Feature: gene Location: 3337774-3338061 bp Ori: AQV99074.1 Feature: domain Description: DUF5372 Location: 3337792-3338023 bp Feature: domain Description: DUF5372 Location: 3337792-3338023 bp Feature: gene Location: 3338160-3338447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_Bug_TTT (cd07012), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), YiiM (COG2258), HTH_32 (pfam13565), Tra5 (COG2801), CheY (COG0784), RND_mfp (TIGR01730), CusA (COG3696)
PRK10428 (hypothetical protein; Provisional), PRK07487 (amidase; Provisional), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), DUF839 (pfam05787), YIH1 (COG1739), YdeN (COG3545), MFS_ExuT_GudP_like (cd17319), DUF5372 (pfam17342)

Seq: CP017757.2 Cupriavidus necator strain NH9 chromosome 1, complete sequence (4347557 bp)
Overview 1 RT 1: 524063-529888 bp 2 RT 2: 608896-619800 bp 3 RT 3: 637318-645551 bp 4 RT 4: 821399-828082 bp 5 RT 5: 1046025-1056317 bp 6 RT 6: 1155948-1160723 bp 7 RT 7: 1664459-1673848 bp 8 RT 8: 2130266-2135958 bp 9 RT 9: 2451386-2457668 bp 10 RT 10: 2624978-2630854 bp 11 RT 11: 2953130-2963106 bp 12 RT 12: 3529721-3538693 bp 13 RT 13: 3608157-3615127 bp 14 RT 14: 3720914-3726255 bp 15 RT 15: 4247318-4254581 bp Neighborhood of RT #1 [524063, 529896] DUF5372 RVT-GII PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM resist_ArsH PRK10026 Neighborhood of RT #2 [608896, 619889] COG3547 RVT-GII GIIM HTH_23 HTH_23 DDE_3 COG3547 RVT_N RVT-GII GIIM YciA ATM1 Neighborhood of RT #3 [637318, 645589] rpsI CcmA RVT_N RVT-GII GIIM HNHc PRK13623 RVT-GII GIIM PhyH HTH_1 PBP2_PAO1_like Neighborhood of RT #4 [821399, 828144] COG3547 RVT-GII GIIM COG3448 ClcA CBS_pair_Sp... Neighborhood of RT #5 [1046025, 1056328] CoAse PRK05320 RVT_N RVT-GII GIIM HNHc dnaE MsbA_lipidA Neighborhood of RT #6 [1155948, 1160734] HiuH COG3748 RVT-GII GIIM Gdt1 Neighborhood of RT #7 [1664459, 1673886] COG5631 RVT_N RVT-GII GIIM HNHc PRK05297 SLC-NCS1sbd_CobB-like Neighborhood of RT #8 [2130266, 2135963] MhpD RVT-GII SnoaL_2 PRK06172 Neighborhood of RT #9 [2451386, 2457742] gram_neg_porins RVT-GII GIIM PRK06498 INT_RitA_C_like Neighborhood of RT #10 [2624978, 2630883] Iron_traffic PRK00702 RVT_N RVT-GII GIIM HNHc PRK05269 SIRT5_Af1_CobB Neighborhood of RT #11 [2953130, 2963138] ActP PRK00174 RVT_N RVT-GII GIIM HNHc RhaT TtdA FumA Neighborhood of RT #12 [3529721, 3538725] BaeS PRK15347 RVT_N RVT-GII GIIM HNHc PRK05627 ileS Neighborhood of RT #13 [3608157, 3615159] SecD secF RVT-GII GIIM AtoC BaeS Neighborhood of RT #14 [3720914, 3726257] SymE_toxin RVT-Retrons PRK07209 Neighborhood of RT #15 [4247318, 4254583] RarD PBP2_TRAP_alpha-ketoacid RVT_N RVT-GII GIIM HNHc Maltoporin-like Feature: gene Location: 524063-524395 bp Feature: gene Location: 524449-524736 bp Ori: AQV92757.1 Feature: domain Description: DUF5372 Location: 524467-524698 bp Feature: domain Description: DUF5372 Location: 52 4467-52 4698 bp Feature: gene Location: 524754-524978 bp Ori: AVK72186.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524766-524973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 4766-52 4973 bp Feature: gene Location: 524993-527206 bp Ori: AQV92758.1 Feature: domain Description: PinE Location: 525041-525629 bp Feature: domain Description: PinE Location: 52 5041-52 562 9 bp Feature: domain Description: Zn_ribbon_recom Location: 525989-526157 bp Feature: domain Description: Zn_ribbon_recom Location: 52 5989-52 6157 bp Feature: domain Description: HTH_17 Location: 526868-526991 bp Feature: domain Description: HTH_17 Location: 52 6868-52 6991 bp Feature: domain Description: HTH_17 Location: 527051-527165 bp Feature: domain Description: HTH_17 Location: 52 7051-52 7165 bp Feature: gene Location: 527199-527363 bp Feature: gene Location: 527685-528524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527688-528078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 7688-52 8078 bp Feature: domain Description: GIIM Note: maturase Location: 528129-528345 bp Feature: domain Description: GIIM Note: maturase Location: 52 812 9-52 8345 bp Feature: gene Location: 528710-529474 bp Ori: AQV92760.1 Feature: domain Description: resist_ArsH Location: 528725-529379 bp Feature: domain Description: resist_ArsH Location: 52 872 5-52 9379 bp Feature: gene Location: 529471-529896 bp Ori: AQV92761.1 Feature: domain Description: PRK10026 Location: 529480-529888 bp Feature: domain Description: PRK1002 6 Location: 52 9480-52 9888 bp Feature: gene Location: 608896-610026 bp Ori: AQV92830.1 Feature: domain Description: COG3547 Location: 609010-609904 bp Feature: domain Description: COG3547 Location: 609010-609904 bp Feature: gene Location: 610145-610471 bp Feature: gene Location: 610510-611988 bp Ori: AQV92832.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 610921-611608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61092 1-611608 bp Feature: domain Description: GIIM Note: maturase Location: 611689-611899 bp Feature: domain Description: GIIM Note: maturase Location: 611689-611899 bp Feature: gene Location: 612696-613787 bp Ori: AQV92833.1 Feature: domain Description: HTH_23 Location: 612798-612930 bp Feature: domain Description: HTH_2 3 Location: 612 798-612 930 bp Feature: domain Description: HTH_23 Location: 613038-613107 bp Feature: domain Description: HTH_2 3 Location: 613038-613107 bp Feature: domain Description: DDE_3 Location: 613221-613656 bp Feature: domain Description: DDE_3 Location: 6132 2 1-613656 bp Feature: gene Location: 613875-614951 bp Ori: AQV92834.1 Feature: domain Description: COG3547 Location: 613995-614898 bp Feature: domain Description: COG3547 Location: 613995-614898 bp Feature: gene Location: 614942-616441 bp Ori: AQV92835.1 Feature: domain Description: RVT_N Location: 615005-615239 bp Feature: domain Description: RVT_N Location: 615005-6152 39 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615293-615935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6152 93-615935 bp Feature: domain Description: GIIM Note: maturase Location: 615986-616220 bp Feature: domain Description: GIIM Note: maturase Location: 615986-6162 2 0 bp Feature: gene Location: 617477-617881 bp Ori: AQV92836.1 Feature: domain Description: YciA Location: 617519-617876 bp Feature: domain Description: YciA Location: 617519-617876 bp Feature: gene Location: 617991-619889 bp Ori: AQV92837.1 Feature: domain Description: ATM1 Location: 618318-619800 bp Feature: domain Description: ATM1 Location: 618318-619800 bp Feature: gene Location: 637318-637710 bp Ori: AQV92856.1 Feature: domain Description: rpsI Location: 637330-637708 bp Feature: domain Description: rpsI Location: 637330-637708 bp Feature: gene Location: 637968-638456 bp Ori: AQV92857.1 Feature: domain Description: CcmA Location: 637980-638346 bp Feature: domain Description: CcmA Location: 637980-638346 bp Feature: gene Location: 639691-641388 bp Ori: AQV92858.1 Feature: domain Description: RVT_N Location: 639748-639991 bp Feature: domain Description: RVT_N Location: 639748-639991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640036-640684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640036-640684 bp Feature: domain Description: GIIM Note: maturase Location: 640735-640969 bp Feature: domain Description: GIIM Note: maturase Location: 640735-640969 bp Feature: domain Description: HNHc Note: nucleases Location: 641188-641353 bp Feature: domain Description: HNHc Note: nucleases Location: 641188-641353 bp Feature: gene Location: 641501-641869 bp Ori: AQV92859.1 Feature: domain Description: PRK13623 Location: 641534-641867 bp Feature: domain Description: PRK1362 3 Location: 641534-641867 bp Feature: gene Location: 642319-643689 bp Ori: AQV92860.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642652-643267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642 652 -6432 67 bp Feature: domain Description: GIIM Note: maturase Location: 643330-643531 bp Feature: domain Description: GIIM Note: maturase Location: 643330-643531 bp Feature: gene Location: 643789-644586 bp Ori: AQV92861.1 Feature: domain Description: PhyH Location: 643813-644572 bp Feature: domain Description: PhyH Location: 643813-644572 bp Feature: gene Location: 644678-645589 bp Ori: AQV92862.1 Feature: domain Description: HTH_1 Location: 644696-644876 bp Feature: domain Description: HTH_1 Location: 644696-644876 bp Feature: domain Description: PBP2_PAO1_like Location: 644963-645551 bp Feature: domain Description: PBP2 _PAO1_like Location: 644963-645551 bp Feature: gene Location: 821399-822529 bp Ori: AQV93024.1 Feature: domain Description: COG3547 Location: 821513-822407 bp Feature: domain Description: COG3547 Location: 82 1513-82 2 407 bp Feature: gene Location: 822648-822974 bp Feature: gene Location: 823013-824491 bp Ori: AQV93026.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 823424-824111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 342 4-82 4111 bp Feature: domain Description: GIIM Note: maturase Location: 824192-824402 bp Feature: domain Description: GIIM Note: maturase Location: 82 4192 -82 4402 bp Feature: gene Location: 825111-826250 bp Ori: AQV93027.1 Feature: domain Description: COG3448 Location: 825147-826233 bp Feature: domain Description: COG3448 Location: 82 5147-82 62 33 bp Feature: gene Location: 826387-828144 bp Ori: AQV93028.1 Feature: domain Description: ClcA Location: 826441-827689 bp Feature: domain Description: ClcA Location: 82 6441-82 7689 bp Feature: domain Description: CBS_pair_Sp... Location: 827740-828082 bp Feature: domain Description: CBS_pair_Sp... Location: 82 7740-82 8082 bp Feature: gene Location: 1046025-1046705 bp Ori: AQV93212.1 Feature: domain Description: CoAse Location: 1046205-1046685 bp Feature: domain Description: CoAse Location: 10462 05-1046685 bp Feature: gene Location: 1046734-1047582 bp Ori: AQV93213.1 Feature: domain Description: PRK05320 Location: 1046737-1047505 bp Feature: domain Description: PRK0532 0 Location: 1046737-1047505 bp Feature: gene Location: 1047746-1049446 bp Ori: AQV93214.1 Feature: domain Description: RVT_N Location: 1047803-1048046 bp Feature: domain Description: RVT_N Location: 1047803-1048046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1048091-1048739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1048091-1048739 bp Feature: domain Description: GIIM Note: maturase Location: 1048790-1049024 bp Feature: domain Description: GIIM Note: maturase Location: 1048790-104902 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1049249-1049408 bp Feature: domain Description: HNHc Note: nucleases Location: 10492 49-1049408 bp Feature: gene Location: 1050728-1054240 bp Ori: AQV93215.1 Feature: domain Description: dnaE Location: 1050743-1054208 bp Feature: domain Description: dnaE Location: 1050743-10542 08 bp Feature: gene Location: 1054550-1056328 bp Ori: AQV93216.1 Feature: domain Description: MsbA_lipidA Location: 1054610-1056317 bp Feature: domain Description: MsbA_lipidA Location: 1054610-1056317 bp Feature: gene Location: 1155948-1156301 bp Ori: AQV93311.1 Feature: domain Description: HiuH Location: 1155951-1156299 bp Feature: domain Description: HiuH Location: 1155951-11562 99 bp Feature: gene Location: 1156333-1157550 bp Ori: AQV93312.1 Feature: domain Description: COG3748 Location: 1156336-1157542 bp Feature: domain Description: COG3748 Location: 1156336-1157542 bp Feature: gene Location: 1158114-1159484 bp Ori: AQV93313.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158447-1159062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158447-1159062 bp Feature: domain Description: GIIM Note: maturase Location: 1159125-1159326 bp Feature: domain Description: GIIM Note: maturase Location: 115912 5-115932 6 bp Feature: gene Location: 1159604-1160020 bp Feature: gene Location: 1160159-1160734 bp Ori: AQV93315.1 Feature: domain Description: Gdt1 Location: 1160162-1160723 bp Feature: domain Description: Gdt1 Location: 1160162 -116072 3 bp Feature: gene Location: 1664459-1665064 bp Ori: AQV93756.1 Feature: domain Description: COG5631 Location: 1664540-1665062 bp Feature: domain Description: COG5631 Location: 1664540-1665062 bp Feature: gene Location: 1665327-1665632 bp Feature: gene Location: 1666327-1668027 bp Ori: AQV93758.1 Feature: domain Description: RVT_N Location: 1666384-1666627 bp Feature: domain Description: RVT_N Location: 1666384-166662 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1666672-1667320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1666672 -166732 0 bp Feature: domain Description: GIIM Note: maturase Location: 1667371-1667605 bp Feature: domain Description: GIIM Note: maturase Location: 1667371-1667605 bp Feature: domain Description: HNHc Note: nucleases Location: 1667824-1667989 bp Feature: domain Description: HNHc Note: nucleases Location: 166782 4-1667989 bp Feature: gene Location: 1668204-1672250 bp Ori: AQV93759.1 Feature: domain Description: PRK05297 Location: 1668219-1672248 bp Feature: domain Description: PRK052 97 Location: 16682 19-1672 2 48 bp Feature: gene Location: 1672486-1673886 bp Ori: AQV93760.1 Feature: domain Description: SLC-NCS1sbd_CobB-like Location: 1672552-1673848 bp Feature: domain Description: SLC-NCS1sbd_CobB-like Location: 1672 552 -1673848 bp Feature: gene Location: 2130266-2131171 bp Ori: AQV94159.1 Feature: domain Description: MhpD Location: 2130452-2131157 bp Feature: domain Description: MhpD Location: 2 130452 -2 131157 bp Feature: gene Location: 2131423-2132509 bp Feature: gene Location: 2132866-2134344 bp Ori: AQV94160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2133277-2133964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1332 77-2 133964 bp Feature: gene Location: 2134804-2135178 bp Ori: AQV94161.1 Feature: domain Description: SnoaL_2 Location: 2134819-2135095 bp Feature: domain Description: SnoaL_2 Location: 2 134819-2 135095 bp Feature: gene Location: 2135196-2135963 bp Ori: AQV94162.1 Feature: domain Description: PRK06172 Location: 2135199-2135958 bp Feature: domain Description: PRK06172 Location: 2 135199-2 135958 bp Feature: gene Location: 2451386-2452543 bp Ori: AQV94449.1 Feature: domain Description: gram_neg_porins Location: 2451452-2452541 bp Feature: domain Description: gram_neg_porins Location: 2 451452 -2 452 541 bp Feature: gene Location: 2452939-2453127 bp Feature: gene Location: 2453737-2455107 bp Ori: AQV94451.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454070-2454685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 454070-2 454685 bp Feature: domain Description: GIIM Note: maturase Location: 2454748-2454949 bp Feature: domain Description: GIIM Note: maturase Location: 2 454748-2 454949 bp Feature: gene Location: 2455560-2457140 bp Ori: AQV94452.1 Feature: domain Description: PRK06498 Location: 2455563-2457138 bp Feature: domain Description: PRK06498 Location: 2 455563-2 457138 bp Feature: gene Location: 2457446-2457742 bp Ori: AVK72203.1 Feature: domain Description: INT_RitA_C_like Location: 2457476-2457668 bp Feature: domain Description: INT_RitA_C_like Location: 2 457476-2 457668 bp Feature: gene Location: 2624978-2625250 bp Ori: AQV94599.1 Feature: domain Description: Iron_traffic Location: 2624981-2625242 bp Feature: domain Description: Iron_traffic Location: 2 62 4981-2 62 52 42 bp Feature: gene Location: 2625321-2626007 bp Ori: AQV94600.1 Feature: domain Description: PRK00702 Location: 2625324-2625996 bp Feature: domain Description: PRK00702 Location: 2 62 532 4-2 62 5996 bp Feature: gene Location: 2626128-2627828 bp Ori: AQV94601.1 Feature: domain Description: RVT_N Location: 2626185-2626428 bp Feature: domain Description: RVT_N Location: 2 62 6185-2 62 642 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2626473-2627121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 6473-2 62 712 1 bp Feature: domain Description: GIIM Note: maturase Location: 2627172-2627406 bp Feature: domain Description: GIIM Note: maturase Location: 2 62 7172 -2 62 7406 bp Feature: domain Description: HNHc Note: nucleases Location: 2627631-2627790 bp Feature: domain Description: HNHc Note: nucleases Location: 2 62 7631-2 62 7790 bp Feature: gene Location: 2629125-2630081 bp Ori: AQV94602.1 Feature: domain Description: PRK05269 Location: 2629128-2630070 bp Feature: domain Description: PRK052 69 Location: 2 62 912 8-2 630070 bp Feature: gene Location: 2630116-2630883 bp Ori: AQV94603.1 Feature: domain Description: SIRT5_Af1_CobB Location: 2630191-2630854 bp Feature: domain Description: SIRT5_Af1_CobB Location: 2 630191-2 630854 bp Feature: gene Location: 2953130-2955181 bp Ori: AQV94906.1 Feature: domain Description: ActP Location: 2953247-2955176 bp Feature: domain Description: ActP Location: 2 9532 47-2 955176 bp Feature: gene Location: 2955283-2957265 bp Ori: AQV94907.1 Feature: domain Description: PRK00174 Location: 2955325-2957260 bp Feature: domain Description: PRK00174 Location: 2 95532 5-2 9572 60 bp Feature: gene Location: 2958601-2960301 bp Ori: AQV94908.1 Feature: domain Description: RVT_N Location: 2958658-2958901 bp Feature: domain Description: RVT_N Location: 2 958658-2 958901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2958946-2959594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 958946-2 959594 bp Feature: domain Description: GIIM Note: maturase Location: 2959645-2959879 bp Feature: domain Description: GIIM Note: maturase Location: 2 959645-2 959879 bp Feature: domain Description: HNHc Note: nucleases Location: 2960104-2960263 bp Feature: domain Description: HNHc Note: nucleases Location: 2 960104-2 9602 63 bp Feature: gene Location: 2960501-2961460 bp Ori: AQV94909.1 Feature: domain Description: RhaT Location: 2960537-2961395 bp Feature: domain Description: RhaT Location: 2 960537-2 961395 bp Feature: gene Location: 2961615-2963138 bp Ori: AQV94910.1 Feature: domain Description: TtdA Location: 2961618-2962524 bp Feature: domain Description: TtdA Location: 2 961618-2 962 52 4 bp Feature: domain Description: FumA Location: 2962566-2963106 bp Feature: domain Description: FumA Location: 2 962 566-2 963106 bp Feature: gene Location: 3529721-3531535 bp Ori: AQV95433.1 Feature: domain Description: BaeS Location: 3529982-3531098 bp Feature: domain Description: BaeS Location: 352 9982 -3531098 bp Feature: domain Description: PRK15347 Location: 3531167-3531461 bp Feature: domain Description: PRK15347 Location: 3531167-3531461 bp Feature: gene Location: 3532514-3532732 bp Feature: gene Location: 3532891-3534591 bp Ori: AQV95434.1 Feature: domain Description: RVT_N Location: 3532948-3533191 bp Feature: domain Description: RVT_N Location: 3532 948-3533191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3533236-3533884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35332 36-3533884 bp Feature: domain Description: GIIM Note: maturase Location: 3533935-3534169 bp Feature: domain Description: GIIM Note: maturase Location: 3533935-3534169 bp Feature: domain Description: HNHc Note: nucleases Location: 3534388-3534553 bp Feature: domain Description: HNHc Note: nucleases Location: 3534388-3534553 bp Feature: gene Location: 3534713-3535708 bp Ori: AQV95435.1 Feature: domain Description: PRK05627 Location: 3534722-3535631 bp Feature: domain Description: PRK0562 7 Location: 353472 2 -3535631 bp Feature: gene Location: 3535831-3538725 bp Ori: AQV95436.1 Feature: domain Description: ileS Location: 3535864-3538693 bp Feature: domain Description: ileS Location: 3535864-3538693 bp Feature: gene Location: 3608157-3610028 bp Ori: AQV95504.1 Feature: domain Description: SecD Location: 3608397-3609975 bp Feature: domain Description: SecD Location: 3608397-3609975 bp Feature: gene Location: 3610092-3611063 bp Ori: AQV95505.1 Feature: domain Description: secF Location: 3610116-3610995 bp Feature: domain Description: secF Location: 3610116-3610995 bp Feature: gene Location: 3611170-3612540 bp Ori: AQV95506.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3611503-3612118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3611503-3612 118 bp Feature: domain Description: GIIM Note: maturase Location: 3612181-3612382 bp Feature: domain Description: GIIM Note: maturase Location: 3612 181-3612 382 bp Feature: gene Location: 3613022-3614029 bp Ori: AQV95507.1 Feature: domain Description: AtoC Location: 3613061-3613478 bp Feature: domain Description: AtoC Location: 3613061-3613478 bp Feature: gene Location: 3614026-3615159 bp Ori: AQV95508.1 Feature: domain Description: BaeS Location: 3614197-3615127 bp Feature: domain Description: BaeS Location: 3614197-361512 7 bp Feature: gene Location: 3720914-3721198 bp Feature: gene Location: 3722184-3722399 bp Ori: AVK72211.1 Feature: domain Description: SymE_toxin Location: 3722283-3722391 bp Feature: domain Description: SymE_toxin Location: 372 2 2 83-372 2 391 bp Feature: gene Location: 3722786-3723730 bp Ori: AVK72212.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3722894-3723488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 372 2 894-372 3488 bp Feature: gene Location: 3723731-3724675 bp Feature: gene Location: 3725070-3726257 bp Ori: AQV95616.1 Feature: domain Description: PRK07209 Location: 3725073-3726255 bp Feature: domain Description: PRK072 09 Location: 372 5073-372 62 55 bp Feature: gene Location: 4247318-4248202 bp Ori: AQV96095.1 Feature: domain Description: RarD Location: 4247327-4248185 bp Feature: domain Description: RarD Location: 42 4732 7-42 48185 bp Feature: gene Location: 4248372-4249508 bp Ori: AQV96096.1 Feature: domain Description: PBP2_TRAP_alpha-ketoacid Location: 4248522-4249488 bp Feature: domain Description: PBP2 _TRAP_alpha-ketoacid Location: 42 4852 2 -42 49488 bp Feature: gene Location: 4249792-4251504 bp Ori: AQV96097.1 Feature: domain Description: RVT_N Location: 4249849-4250092 bp Feature: domain Description: RVT_N Location: 42 49849-42 50092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4250137-4250785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 50137-42 50785 bp Feature: domain Description: GIIM Note: maturase Location: 4250839-4251070 bp Feature: domain Description: GIIM Note: maturase Location: 42 50839-42 51070 bp Feature: domain Description: HNHc Note: nucleases Location: 4251295-4251454 bp Feature: domain Description: HNHc Note: nucleases Location: 42 512 95-42 51454 bp Feature: gene Location: 4251609-4251815 bp Feature: gene Location: 4252925-4254583 bp Ori: AQV96098.1 Feature: domain Description: Maltoporin-like Location: 4253486-4254581 bp Feature: domain Description: Maltoporin-like Location: 42 53486-42 54581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), GIIM (pfam08388), resist_ArsH (TIGR02690), PRK10026 (arsenate reductase (glutaredoxin)), COG3547 (Transposase ), HTH_23 (pfam13384)
DDE_3 (pfam13358), RVT_N (pfam13655), YciA (COG1607), ATM1 (COG5265), rpsI (PRK00132), CcmA (COG4133), HNHc (smart00507), PRK13623 (iron-sulfur cluster insertion protein ErpA; Provisional), PhyH (pfam05721), HTH_1 (pfam00126)
PBP2_PAO1_like (cd08412), COG3448 (CBS-domain-containing membrane protein ), ClcA (COG0038), CBS_pair_Sp..., CoAse (cd03426), PRK05320 (rhodanese superfamily protein; Provisional), dnaE (PRK07374), MsbA_lipidA (TIGR02203), HiuH (COG2351), COG3748 (Uncharacterized membrane protein )
Gdt1 (COG2119), COG5631 (Predicted transcription regulator, contains HTH domain, MarR family ), PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional), SLC-NCS1sbd_CobB-like (cd11484), MhpD (COG3971), SnoaL_2 (pfam12680), PRK06172 (SDR family oxidoreductase), gram_neg_porins (cd00342), PRK06498 (isocitrate lyase; Provisional), INT_RitA_C_like (cd01188)
Iron_traffic (pfam04362), PRK00702 (ribose-5-phosphate isomerase RpiA), PRK05269 (transaldolase B; Provisional), SIRT5_Af1_CobB (cd01412), ActP (COG4147), PRK00174 (acetyl-CoA synthetase; Provisional), RhaT (TIGR00776), TtdA (COG1951), FumA (COG1838), BaeS (COG0642)
PRK15347 (two component system sensor kinase), PRK05627 (bifunctional riboflavin kinase/FAD synthetase), ileS (TIGR00392), SecD (COG0342), secF (PRK13022), AtoC (COG2204), SymE_toxin (pfam08845), RVT-Retrons, PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), RarD (COG2962)
PBP2_TRAP_alpha-ketoacid (cd13682), Maltoporin-like (cd01346)