myRT

myRT report for GCA_002011945.1_ASM201194v1

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Seq: CP018946.1 Escherichia coli strain Ecol_224 plasmid pEC224_2, complete sequence (87114 bp)
Overview 1 RT 1: 19674-23731 bp Neighborhood of RT #1 [19674, 23731] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 19674-19907 bp Ori: AQV17809.1 Feature: domain Description: DUF905 Location: 19704-19902 bp Feature: domain Description: DUF905 Location: 1 9704-1 9902 bp Feature: gene Location: 19965-20450 bp Ori: AQV17810.1 Feature: domain Description: PRK13732 Location: 19968-20448 bp Feature: domain Description: PRK1 3732 Location: 1 9968-20448 bp Feature: gene Location: 20600-22501 bp Ori: AQV17811.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20867-21698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20867-21 698 bp Feature: domain Description: Intron_maturas2 Location: 21812-22070 bp Feature: domain Description: Intron_maturas2 Location: 21 81 2-22070 bp Feature: domain Description: HNHc Note: nucleases Location: 22244-22406 bp Feature: domain Description: HNHc Note: nucleases Location: 22244-22406 bp Feature: gene Location: 23150-23356 bp Feature: gene Location: 23519-23731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP018948.1 Escherichia coli strain Ecol_224 chromosome, complete genome (4891786 bp)
Overview 1 RT 1: 4352119-4357165 bp Neighborhood of RT #1 [4352119, 4357176] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP Feature: gene Location: 4352119-4353705 bp Ori: AQV22234.1 Feature: domain Description: prfC Location: 4352137-4353703 bp Feature: domain Description: prfC Location: 4352 137-4353703 bp Feature: gene Location: 4353925-4354185 bp Ori: AQV22235.1 Feature: domain Description: PRK10597 Location: 4353928-4354168 bp Feature: domain Description: PRK10597 Location: 435392 8-4354168 bp Feature: gene Location: 4354543-4356147 bp Ori: AQV22236.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4354834-4355425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4354834-435542 5 bp Feature: domain Description: TIR_2 Location: 4355752-4356085 bp Feature: domain Description: TIR_2 Location: 4355752 -4356085 bp Feature: gene Location: 4356433-4356605 bp Feature: gene Location: 4356592-4357176 bp Ori: AQV22237.1 Feature: domain Description: Caudo_TAP Location: 4356808-4357165 bp Feature: domain Description: Caudo_TAP Location: 4356808-4357165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), Caudo_TAP (pfam02413)