myRT

myRT report for GCA_002011965.1_ASM201196v1

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Seq: CP018952.1 Escherichia coli strain Ecol_276 plasmid pEC276_1, complete sequence (132345 bp)
Overview 1 RT 1: 1194-3752 bp 2 RT 2: 15552-18608 bp 3 RT 3: 65259-69284 bp Neighborhood of RT #1 [1194, 3752] Sigma70_r4_2 Sigma70_r4_2 PRK10173 RVT-GII Neighborhood of RT #2 [15552, 18646] RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [65259, 69289] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 1194-1679 bp Ori: AQV23073.1 Feature: domain Description: Sigma70_r4_2 Location: 1254-1326 bp Feature: domain Description: Sigma70_r4_2 Location: 1 254-1 326 bp Feature: domain Description: Sigma70_r4_2 Location: 1395-1455 bp Feature: domain Description: Sigma70_r4_2 Location: 1 395-1 455 bp Feature: gene Location: 1801-2545 bp Feature: domain Description: PRK10173 Location: 1804-2242 bp Feature: domain Description: PRK1 01 73 Location: 1 804-2242 bp Feature: gene Location: 2584-3072 bp Ori: AQV23222.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2842-2914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2842-291 4 bp Feature: gene Location: 3041-3466 bp Feature: gene Location: 3501-3752 bp Feature: gene Location: 15552-15803 bp Feature: gene Location: 15838-16263 bp Feature: gene Location: 16217-17740 bp Ori: AQV23096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16490-17222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6490-1 7222 bp Feature: domain Description: GIIM Note: maturase Location: 17297-17495 bp Feature: domain Description: GIIM Note: maturase Location: 1 7297-1 7495 bp Feature: gene Location: 17815-18213 bp Ori: AQV23097.1 Feature: domain Description: PHA02517 Location: 17824-18169 bp Feature: domain Description: PHA0251 7 Location: 1 7824-1 81 69 bp Feature: gene Location: 18242-18646 bp Ori: AQV23098.1 Feature: domain Description: InsE Location: 18272-18608 bp Feature: domain Description: InsE Location: 1 8272-1 8608 bp Feature: gene Location: 65259-65559 bp Feature: gene Location: 65561-65767 bp Feature: gene Location: 66445-68346 bp Ori: AQV23146.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66712-67543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6671 2-67543 bp Feature: domain Description: Intron_maturas2 Location: 67657-67915 bp Feature: domain Description: Intron_maturas2 Location: 67657-6791 5 bp Feature: domain Description: HNHc Note: nucleases Location: 68089-68251 bp Feature: domain Description: HNHc Note: nucleases Location: 68089-68251 bp Feature: gene Location: 68496-68993 bp Ori: AQV23147.1 Feature: domain Description: PRK13732 Location: 68499-68991 bp Feature: domain Description: PRK1 3732 Location: 68499-68991 bp Feature: gene Location: 69056-69289 bp Ori: AQV23148.1 Feature: domain Description: DUF905 Location: 69086-69284 bp Feature: domain Description: DUF905 Location: 69086-69284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4_2 (pfam08281), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP018953.1 Escherichia coli strain Ecol_276 chromosome, complete genome (4898796 bp)
Overview 1 RT 1: 4764750-4769648 bp Neighborhood of RT #1 [4764750, 4769648] RVT-Retrons Feature: gene Location: 4764750-4764980 bp Feature: gene Location: 4765195-4765434 bp Feature: gene Location: 4766005-4767762 bp Ori: AQV27786.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4766149-4766767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4766149-4766767 bp Feature: gene Location: 4768009-4769136 bp Feature: gene Location: 4769133-4769648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons